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HomeMy WebLinkAboutAPA2919SUSITNA .HYDROELECTRIC PROJECT FEDERAL ENERGY·RE.GULATORY COMMISSION PROJECT No,711-4 Llua.'. )lJ.S4 ....a:'111&.,'",.... J»1tI$If ,.·~ C ARACTERIZATION OF AQUATIC HA IT A TS IN THE TALKEETNA-TO-D VIL CANYON SEGMENT OF TH SUSITNA RIVER,ALASKA PREPARED BY ~::.==A Power AuthorIty =-========.J. lJt.I>ER CONTR C TO UOO~c=~£~ SUSITNA JOINT V NTURE FINAL REPORT OCTOBER 188& DOCUMENT No.2919 - - - SUSITNA HYDROELECTRIC PROJECT CHARACTERIZATION OF AQUATIC HABITATS IN THE TALKEETNA-TO--DEVIL CANYON SEGMENT OF THE SUSITNJ~RIVER,ALASKA Prepared by E.Woody Trihey and Associates and Arctic Environmental Information and Data Center University of Alaska-Fairbanks Under Contract to Harza-Ebasco Susitna Joint Venture P~epared for Alaska Power Authority Document No.2919 Susitna File No.4.3.1.3 TK '4';\5' IS~ FLfl~ Y\.O,~4\9 - ARLIS Alaska Resources Library &Infonnatl0n Servtces Anchorage.Alaska Final Report October 1985 - - - ..- - - - Nm~ICE ANY QUESTIONS OR COMMENTS CONCERNING THIS REPORT SHOULD BE DIRECTED TO THE ALASKA POWER AUTHORITY SUSITNA PROJECT OFFICE ACKNOWLEDGEMENTS This report was funded by the Alaska Power Authority as part of the licensing studies for the proposed Susitna Hydroelectric Project.The authors acknowledge the following Susitna Hydro Aquatic Study Team members for thei r assistance in the preparation of this report:Shelley Williams,E.Woody Trihey and Associates,for suggestions which improved the organization of the rE!port;Denise Cote,Arctic Environmental Information and Data Center,and Linda Sewright for technical editing;Bill Wilson,Arctic Environmental Information and Data Center,for review comments;Jean Baldridge,Entrix,and- Greg Reub,E.Woody Trihey and Associates,for field data collection;Dr. - Alexander Milner and Diane Hilliard,E.Woody Trihey and Associates,for technical assistance with the statistical analyses;Paul Suchanek,Alaska Department of Fi sh and Game (ADF&G),for explanati on of ADF&G substrate and cover codes;Wanda Seamster,Arctic Enviironmental Information and Data Center, for graphics expertise;and Sally Healey and Cheryl Martinez,Arctic Environ- --mental Information and Data Center,and Peggy Skeers,for diligently typing the manuscript. J:I'~ L. .q- co I:") IN.-'0:::1" '0:::1" 10 10 10 ~I'"''''Ir'-- 1M II:"') ....- _._~_C ----------------------,---------_...------------ - - - PREFACE The goal of the Alaska Power Authority in identifying environmentally acceptable flow regimes for the proposE!d Susitna Hydroelectric Project is the maintenance of existing fish resources ,and levels of production.This goal is consistent with mitigation goals of the U.S.Fish and Wildlife Service and the Alaska Department of Fish and Game.Maintenance of naturally occurring fish populations and habitats is the preferrl~d goal in agency mitigation policies. In 1982 t following two years of baseline studies,a multi-disciplinary approach to quantify effects of the proposed Susitna Hydroelectric Project on existing fish habitats and to identify mitigation opportunities was initiated. The Instream Flow Relationships Studies (IFRS)focuses on the response of fish habitats in the middle Susitna River to incremental changes in mainstem discharge,temperature and water quality.As part of this multi-disciplinary effort t a technical report series was planned that would (1)describe the existing fish resources of the Susitna River and identify the seasonal habitat requirements of selected species t and (2)evaluate the effects of alternative pr'oj ect des i gns and operati ng scena ri os on physi ca 1 processes whi ch most influence the seasonal availability of fish habitat. The summary report for the IFRS t the Instream Flow Relationships Report (IFRR),(1)identifies the biologic significance of the physical processes evaluated in the technical report series,(2)integrates the findings of the technical report series,and (3)provides quantitative relationships and discussions regarding the influences of incremental changes in streamflow, i; --------------_._----_._--------------------------------------------------- - - stream temperature,and water quality on fish habitats in the middle Susitna River on a seasonal basis. The IFRR consists of two volumes.Volume I uses project reports,data and p'rofessional judgement available before March 1985 to identify evaluation slPecies,important life stages,and habitats.The report ranks a variety of physical habitat components with regard to their degree"of influence on fish habitat at different times of the year.This ranking considers the biologic n~quirements of the evaluation species and life stage,as well as the physical characteri sti cs of different habitat types,under both natural and anti ci pated with-project conditions.Volume II of the IFRR will address the third objective of the IFRR and prOVide quantitative relationships regarding the influences of incremental changes in streamflow,stream temperature and water quality on fish habitats in the middle Susitna River on a seasonal basis. The influence of incremental changes;n streamflow on the availability and quality of fish habitat is the central theme of the IFRR Volume II analysis. PI"oject-induced changes in stream temperature and water qual ity are used to condition or qualify the forecasted Y'esponses of fish habitat to instream hydraulics.The influence of streamflow on fish habitat will be evaluated at the microhabitat level and presented at the macrohabitat level in terms of a composite weighted usable area curve.This composite curve will describe the combined response of fish habitat at all sites within the same representative group to incremental changes in mainstern discharge. iii ..... Four technical reports are being prepared by E.Woody Trihey and Associates in support of the IFRR Volume II analysis.The function of each report is depicted in a flow diagram and described below . Quantify Wetted Surface Area Response ~ Assess the Representa- tiveness of Modeled and Non-modeled Sites 1 Determine Site- Specific Hydraulic Conditions / - ....... Quantify Streamflow Dependent Habitat Response Functions for Juvenile Chinook and Spawning Chum Salmon RESPONSE OF AQUATIC HABITAT SURFACE AREJ\S TO MAINSTEM DISCHARGE IN THE HILKEETNA-TO-DEVIL CANYON SEGMENT OF THE SUSITNA RIVER,ALASKA This report identifies five aquatic habitat types within the middle Susitna River directly influenced by changes in mainstem discharge and presents the necessary photography and surface area measurements to quantify the change in wettE!d surface area associated with incremental decreases in mainstem discharge between 23000 and 5100 cfs.The report also describes the influence of mainstem discharge on habi tat transformati ons and tabul ates the wetted surface area responses for 172 specific areas using the ten representative groups presented in the Habitat Characterization Report.Surface area measurements presented in thi s report provi de a basi s for extrapolating results from intensively studied modeling sites to the remainder of the middle Susitna River. CHARACTERIZATION OF AQUATIC HABITATS IN THE TALKEETNA-TO-DEVIL CANYON SEGMENT OF THE SUSITNA RIVER,ALASKA This report describes the characterization and classification of 172 specific areas into ten representative groups that are hydro- 109i ca 11y,hydraul i ca 11y and morpho 109i ca 11y simi 1ar.Emphas is is placed on the transformation of spE~cific areas from one habitat type "iv ..... .... .... - - - - - to another in response to incremental decreases in mainstem dis- charge from 23000 cfs to 5100 cfs.Both modeled and nonmodeled sites are classified and a structural habitat index is presented for each specific area based upon subjective evaluation of data obtained through field reconnaissance surveys.Representative groups and structural habitat indices presented in this report provide a basis for extrapolating habitat response functions developed at modeled sites to nonmodeled areas within the remainder of the river . HYDRAULIC RELATIONSHIPS AND MODEL CALIBRATION PROCEDURES AT 1984 STUDY SITES IN THE TALKEETNA-TO-DEVIL CANYON SEGMENT OF THE SUSITNA RIVER,ALASKA This report describes the influence of site-specific hydraulic conditi ons on the avail abil ity of habitat for juvenil e chi nook and spawning chum salmon.Two aquat'ic habitat models are app1ied to quantify s ite-specifi c habitat responses to incremental changes in depth and velocity for both steady and spatially varied streamflow conditions.Summaries of site-specific stage-discharge and flow- discharge relationships are presented as well as a description of data reduction methods and model calibration procedures.Weighted usable area forecasts are provided for juvenile chinook at 8 side channel sites and for spawning chum salmon at 14 side channel and mainstem sites.These habitat response functions provide the basis for the instream flow assessment of the middle Susitna River. RESPONSE OF JUVENILE CHINOOK AND SPAWNING CHUM SALMON HABITAT TO MAINSTEM DISCHARGE IN THE TALKEETNA-TO-DEVIL CANYON SEGMENT OF THE SUSITNA RIVER,ALASKA This report integrates results from the surface area mapping, habitat characterization,and hydraulic modeling reports to provide streamflow dependent habitat response functions for juvenile chinook and spawning chum salmon.Wetted surface area and weighted usable area are the principal determinants of habitat indices provided ;n Part A of the report for juveni1e chinook at each specific area and the ten representative groups identified in the habitat character- izati on report.Part B of thi s report provi des habitat response functions for existing chum salmon spawning sites.The habitat response functions contained in this report will be used for an incremental assessment of the rearing and spawning potential of the entire middle Susitna River under a wide range of natural and with- project streamflows. v TABLE OF CONTENTS ACKNOWLEDGEMENTS II ;... PJ~EFACE '-.. i i i LIST OF TABLES..............................................................................................................vi-;i LIST OF FIGURES.............................................................................................................x L 2., INTRODUCTION -.. I NVESTI GA TI VE FRAMEWORK ..••......••......•...•....•...•.••.....•. 1 12 2.1 HYDROLOGIC COMPONENT........................................17 -2.1.1 2.1.2 2.1.3 2.1.4 2.1.5 Habitat Transformation Tracking .......•..•••....•.••. Breaching Flow •..•....~•••.•••..•.••...•.......•....• Cross-Sectional Geometlry of Side Channel H-ead Be rms IJ .. Cross-Sectional Geometry of Mainstem ...•••.•.......•. Evaluation of Upwellin!].....•....••.•.•........•..••. 17 22 25 27 28 2.2 HYDRAULIC COMPONENT.........................................29 2.2.1 2.2.2 2.2.3 Mean Re,ach Vel Dci ty ~l ,.. Substrate Size ~I •••••••••••••••••••••••••••••• Channel Morphology ..•.,t •••••••••••••••••••••••••••••• 30 31 34 2.3 STRUCTURAL COMPONENT •.•.......,..............................36 2.3.1 Structural Habitat Indiices............•.•.•.•.•.•.•.•38 3.RESULTS AND DISCUSSION ..................................•........49 3.1 HYDROLOGIC COMPONENT........................................49 3.1.1 3.1.2 3.1.3 3.1.4 3.1.5 Habitat Transformation Tracking ......••..•.•...•.•.•. Breaching Flow ....•.....•.•.•.•......•..•..........•. Cross-Sectional Geometry of Side Channel Head Berms ........•.•.............................•.. Cross-Sectional Geometry of Mainstem .........•.•..•.• Evaluation of Upwelling •.•.•...•.•.•••..••......•...• 49 53 53 56 57 3.2 HYDRAULI C COMPONENT.........................................60 --3.2.1 3.2.2 3.2.3 Mean Reach Velocity .. Su,bstrate Si ze . Channe 1 Morpho logy ..•.•.•.....•.........•............ \/i 60 63 64 - TABLE OF CONTENTS (Continued) Page 3.3 STRUCTURAL COMPONENT........................................67 3.3.1 Structural Habitat Indices...........................67 3.4 DEVELOPMENT OF REPRESENTATIVE GROUPS........................68 4.FUNCTION OF RESULTS IN EXTRAPOLATION.............................83 LITERATURE CITED ..89 AIJPENDICES '... .. .. .. .. .. .. .. .. .. .. .. ...... ...... .... ..........92 Appendix 1 Specific Areas Delineated on 23000 cfs Aerial Photography...................................92-Appendix 2 Habitat Inventory Techniques .102 - - Appendix 3 Aquatic Habitat Transformations of Specific Areas of the middle Susitna River at Several Mainstem Discharges Referenced to 23000 cfs..........117 Appendix 4 Approximate Breaching Flows of Specific Areas of the mi ddl e Sus i tna Ri ve r.. .•. ..•.. . . ... . . .. .... .. .122 Appendix 5 Fish Observations....................................125 vii /' LIST OF TABLES Table No. 1. 2. 3. 4. Summary of the differences between the IFIM extrapo- lation procedure for a single-thread river and that developed for a multiple-thrE!ad river •........•••.••..•.•.. Use of black and white aeri,al photography in charac- terization of aquatic habitat ••..••.•.•.......•.•.••••...•. Description of Habitat Transformation Categories .••.•.•.•.. The relationship between the height (h)that water climbs a staff when held perpendicular to the flow and mean reach velocity ...•.•...4~~•••••••••••••••••• 9 14 20 32 5.Cover suitability criteria recommended for use in modeling juvenile chinook habitat under clear water conditions 41...............................40 - .... 6. 7. 8. 9. 10 • 11. Dominant cover/percent cover rating factors •.••••.•.•••.... Channel morphology rating factors for the various combi nations of cross-secti ana 1 geometry types that could be represented at a specific area•....••.•..•......•• Substrate size/substrate embE!ddedness rating factors •...... Streamside vegetation rating factors ..•.••.•...........••.• Structural habitat vari abl eSi and thei r corresponding wei ght;ng factors 41 .. Number of specific areas in each habitat transforma- tion category by evaluation mainstem flow,referenced to 23000 cfs I .. 41 42 44 45 46 50 12.Curve slope classes of plots of wetted top width versus discharge from measurements made at channel head berms at 46 specific areas in the Talkeetna-to- Devil Canyon segment of the Sus itna Ri ver ..•.•..•.•..•..•.• 13.Stage increase at selected cross sections in the Talkeetna-to-Devil Canyon segment of the Susitna River as mainstem discharge increases from 9700 to 23400 56 CfS I~..............................57 14.Summary of the specific areas that possess upwelling in the Talkeetna-to-Devil Canyon segment of the Susitna River fi..............................58 viii - .- Table No 15. 16. 17. 18. 19. 20. 21. 22. 23. 24. 25. 26. LIST OF TABLES (Continued) Definition of subsegments within the Talkeetna-to- Devil Canyon segment of the Susitna River .............•.••. Major side channel complexes of the Talkeetna-to-Devil Canyon segment of the Susitna River ......•.•............... Representative Group I III .. Representative Group II .•.................................. Representative Group III . Representative Group IV ...............................•..... Representative Group V...•.•.•.....•......................• Representative 'Group VI •.•.•.•.•.......•................... Representative Group VII . Representative Group VIII .•...............•................ Representative Group IX .•...••............................. Representative Group X..........................•.....e •••• ix 66 66 73 74 75 76 77 78 79 80 81 82 F'j gure No. 1. 2. 3. 4. 5. ~ 6. ~ LIST OF FIGURES Page Flow chart for the extrapolation methodology...............4 Examples of continuous and discontinuous subsegments.......7 Schematic of aquatic habitat components and descri p- tive variables.............................................13 An indistinct side channel that becomes a distinct side channel with decreasing mainstem discharge............18 Flow chart for classifyin'9 the transformation of aquati c habitat types betwE!en two flows (categori es 0-10).21 Channel relationship betwE~en breach"ing flow and habitat type in the Tal keetna-to-Devi 1 Canyon segment of the Susitna River -.................23 ..... 7. 8. 9. 10. 11. 12. 13. 14. Cross-sectional geometry at the head berm of two channels having the same breaching flow ..•.•...•.•......... The relationship between height (h)and mean reach velocity as depicted by the rise of the wc:.ter colL;lw ag~i nst a staff he 1c perper:o'j cul ar tu the fl 0\'1.•••••••••••• Structural habitat index form for specific area 136.0L . Number of specific areas in each habitat transforma- tion category at various mainstem flows . Representative wetted top width versus discharge plots for each category of curve s"1 ope .•.•.•...•••............... Derivation of a HAl versus discharge curve for a nonmodeled specific area (SA)from the representative curve of a modeled specific area (MS)showing:(a) breaching flow adjustment;(b)structural habitat quality adjustment;(c)the derived curve ................•. ,Flow chart for the stratification pathway of the extrapolation methodol 09y ...".....•...•.•.•.•.•.•.......... Habi tat inventory form "................•............. x 26 32 48 51 54 86 88 104 .... .... 1.INTRODUCTION The Alaska Power Authori ty has proposed the constructi on of two dams on the Susitna River.Construction of the proposed hydroelectric project will alter the flow regime downstream of the dam,resulting in corresponding changes to the quality and quantity of fi sh habitat.The most pronounced i nfl uences of the project are expected to occur in the Talkeetna-to-Devil Canyon segment of the Susitna River (the middle Susitnal River).Two major tributaries,the Talkeetna and Chulitna rivers,will buffer the impacts of the project downstream of Talkeetna. To evaluate the effects on fish habitat of this project,it is necessary to document natural conditions.To this end,fish habitat model ing techniques WE!re applied at a spectrum of aquatic habitats and a methodology was developed to ext:r>apoZate results to other areas of the river.The extrapolation methodology has three components:1)quantification;2)stratification,or groouping of individual aquatic habitats on the basis of hydrologic,hydraulic, and morphologic similarities;and 3)s'imulation.This report focuses on the stratification pathway of analysis.For a detailed discussion of the quantification and simulation pathways,see Klinger-Kingsley (1985)and Steward etal.(1985).The basis of the extrapolation methodology is explained below. To apply or extrapolate the results from modeled sites to nonmodeled areas of the middle Susitna River in order to determine the systemwide response of fish hclbitat quantity and quality to mainstem discharge,it is necessary to assess 1 the representativeness of modeled sites to nonmodeled areas.In the application of the Instream Flow Incremental Methodology (IFIM),which is used ~ in this study and described by Bovee (1982),extrapolation is typically done by identifying segments and subsegme!nts of the subject river that are h.l,drol ogi ca lly,hydraul i ca lly,and morplhol ogi ca lly homogeneous.By model i ng a representative reach of a homogeneous subsegment and extrapolating to the rest of the subsegment on a proportional le!ngth basis,it is possible to develop.- systemwide habitat response to discharge relationships.This approach is F""commonly applied to single-thread rivers. Although multi pl e-thread rivers can be divi ded into homogeneous segments and subsegments in a manner similar to single-thread rivers (Mosley 1982,Glova and Duncan 1985),extrapolation of modeling results from representative reaches of braided river subsegments on a proportional length basis cannot be done routinely with reliable results (Mosley 1983).The braided river environment is too dynamic and variable for the development of quantitative re~lationships between discharge and physical habitat variables such as depth, v€!locity,and channel structure on a river corridorwide basis for use in extrapolation (Mosley 1983). Instead,an approach for evaluating habitat is needed that focuses on portions of the river corridor.By applying modeling techniques at individual channel br'anches of the braided river system,the variability of the physical environment is reduced to a level that permits the development of quantitative relationships between discharge and physical habitat variables.This allows the extrapolation of model results from the study reach (i.e.,representative 2 ----~----------- ..... ..... ..... r1each)to the rest of the channel bra.nch with reliable results.Even with tlhis approach,however,the problem remains of how to extrapolate results from modeled channel branches to the rest of the river to develop systemwide habitat response relationships.It would be impractical to apply modeling t,echniques at every channel branch. lin the fisheries habitat studies of the Talkeetna-to-Devil Canyon segment of the Susitna River,which is a large"frequently braided or split-channel r'iver,an approach to extrapolating results from modeled sites to nonmodeled areas of the river was developed that relies on two data bases which are complementary but different in scope"One data base is used to develop dletailed physical habitat models to sinmZate habitat response to discharge at a number of channel branches representi ng a spectrum of habitat types in the m'iddle Susitna River.The second data base is much broader in scope and includes aerial photo coverage of the entire middle Susitna River at several selected discharges.It also includes reconnaissance level field surveys of sel ected phys ica 1 habitat parameters at nearly a 11 nonma instem channel blranches and severa 1 rna i nstem channel:s.Thi s second data base is used to (1)quantify the relationship of sUI"face area response to discharge of individual channel branches using aerial photography,and (2)stratify or glroup individual channel branches of the middle Susitna River based on common hydrologic,hydraulic,and morphologic characteristics.The three components of the extrapolation methodology (i.e.,quantification,stratification,and s"imulation)and their integration are summarized in Figure 1.As mentioned earlier,this report focuses on the stratification component of the ml:thodo logy. 3 ....., Quantification Quantity surface areas of individual channel branches in the middle Susitna River for each flow for which aerial photography is avail- able to determine the surface area response to mainstem discharge. Stratification Use available infor- mation to stratify indi- vidual aquatic habitats into groups that are hydrologically,hydrau- 1i ca lly,and morpho- logically similar. Int,egration For each evaluation species/life stage: Integrate the quantifi- cation,stratification, and simul,:ition compo- nents to determine the aquatic habitat response to discharge for the entire middle Susitna River. Simulation Simulate the response of aquatic habitat qua 1i ty to di scha rge with habitat modeling techniques at selected a reas of the mi ddl e Susitna River. Fi gure 1.Flow chart for the extrapolation methodology. 4 .- -- !~ There are three pri nci pa 1 differences between the conventi ona 1 I FIM approach to extrapolating model results for a single-thread river system and the m1ethodology presented in this report for relatively complex multiple-thread river systems.First,for multiple-thread river systems,extrapolation from representative reaches to the rest of the homogeneous subsegment is done on a proportional area basis rather than a proportional length basis because of the greater variability in channel widths within homogeneous subsegments of braided river systems.This method of extrapolation is also necessary because of the greater variability in hydrologic and morphologic character within homogeneous subsegments of braided r-i vers compared to thei r si ngl e-thread counterparts. Slecond,in the IFIM procedures for silllgle-thread systems described by Bovee (1982),a segment or subsegment boundary is defined where there is a s'ignificant change in channel slope,flow regime,or morphology.In the context of the IFIM,the middle Susitna River would be considered a segment of the Susitna River because below Talkl:etna the flow regime changes as the Cl1ul itna and Tal keetna rivers contribute flow and above Devil Canyon the channel morphology changes significantly.At the subsegment level the boundaries are not so well-defined.It is at this level that there is a dl:parture in the segmentation criteria for a braided river system as compared to a single-thread river system. Inspection of aerial photography provid1es ample evidence of the variability of channel morphology in the middle Susitna River.Nevertheless,after closer i nspecti on,even the casual observer can also identify cons i derabl e evi dence of repetitive channel form.Examples include relatively long sinuous channels 5 ..... that are peripheral to the main river corridor and shorter,wider channel branches that trace a similar path in plan form.The significance of these morphologically similar channel branches is that they are spatially interspersed throughout the middle Susitna River.Although morphological similarities between parts of the rivl~r are evident,it is not possible to identify aontinuous homogeneous river subsegments containing them,as would be done for morphologically similar portions of a single-thread river system. The solution to this problem,then,is to identify discontinuous homogeneous sllJbsegments based on common hydrologic,hydraulic,and morphologic characteri"stics (see Figure 2).This necessarily involves dividing the river into smaller homogeneous habitat units. In this study,nearly all the individual nonmainstem channels plus several mainstem channels were delineated and labeled on aerial photo reproductions of tine middle Susitna River (se.e Appendix 1).These delineated areas,termed speaifia areas,were then analyzed using aerial photo interpretation tl~chniques and data from reconnaissance level field surveys.By evaluating the hydrologic,hydraulic,and.morphologic character of each specific area, including modeled and nonmodeled sitl~S,it was possible to assess which nonmodeled site should be associated with which modeled site.These groupings of simi 1ar specifi c areas were termed representative groups.In the context of the IFIM,each representative group is equivalent to a homogeneous subsegment.The only difference between representative groups and homogeneous subsegments is that representative groups are spatially discontinuous,whereas homogeneous subsegments in the IFIM are spatially continuous. 6 ---------_._------_..~~~--_.--_-~------------------ SU4t'tn.a.-Riv&r 0t!51TlMtt--,-----------------, .... Figure 2.Examples of continuous and discontinuous subsegments. 7 The third difference between extrapolation methodologies for multiple-thread rivers vs.single-thread rivers is in recognition of the greater variability of nonhydraul ic habitat attributes (i .e.,structural cover,substrate composition)within representative groups of multiple-thread rivers than is· typically associated with homogeneous subsegments of single-thread river systems.Although hydrolo~ic,hydraulic,and morphologic similarities may be strong enough to associate·several spec'ific areas with the same representative ~ group,structural inequalities between specific areas often preclude the conclusion that the specific areas have the same habitat value.A methodology for adjusting the habitat value of specific areas based on structural attributes is discussed in detail in a later section.Table 1 summarizes the differences between the IFIM extrapolat'ion procedure for a single-thread river and that described in this report for multiple-thread river systems. The specific area approach to extrapolating results from modeled sites to nonmodeled areas for multiple-thread riiver systems offers several advantages over conventional river corridorwide extrapolation schemes.Several of these advantages can be summarized as follows:(1)it provides quantitative physical habitat response to disch,arge relationships focused at the representative group level rather than river corridorwide;(2)it simpl ifies field data collection by reducing the effort of data collection in mainstem channels;(3)it simplifies individual model calibration by restricting calibration to one channel at a time;and (4)it increases the reliability of forecasts at model ed sites.Of these advantages,the fi rst and fourth ones are of particular importance. 8 Table 1.Summary of the differences between the IFIM extrapolation procedure for a single-thread river and that developed for a multiple-thread river. - ..... - IFIM Extrapolation for Single-Thread River System Proportional length basis Continuous subsegments Intensively studied representative reaches Extrapolation from representative reaches to associated subsegments without adjustment 9 Extrapolation for Multiple-Thread River System Proportional area basis Discontinuous subsegments termed representative groups Intensively studied representative reaches plus general reconnaissance level survey of entire river system Extrapo 1ati on from representati ve reaches to associated representative groups with adjustment to account for inequalities in structural habitat between specific areas ---,--,-------------------,-,------,-------------- ..- ,..,. ,.... .,... The provision of relationships between quantitative physical habitat response to discharge at the representative group level is of key importance to the middle Susitna River studies since representative groups are often of d"iffering habitat value to particular'fish species.For example,in the m"iddle Susitna River,juvenile chinook salmon (Oncorhynchus tshawytscha)have bl~en identified as a fish evaluation species (E.Woody Trihey &Associates and Woodward-Clyde Consul tants,1985).The most important reari ng habi tat for juvenile chinook salmon is found in side channels,side sloughs,and tributaries (Schmidt et a1.1984).P~n extrapolation methodology with the capability of forecasting habitat response to a changed flow regime for particular habitat types "is necessary in this instance to corroborate with juvenile chinook salmon utilization data bases.River corridorwide extrapolation methodologies do not provide this level of resolution,in addition to the problems associated with low reliability in their forecast capability.The extrapolation methodology developed for this study was designed to mitigate these problems. The disadvantages of the specific area approach to extrapolating results from modeled sites to nonmodeled areas are primarily twofold:(l)it requires a substantial reconnaissance level data base and aerial photo coverage;and (2)it requires considerable analyses to develop representative groups.Since this approach to extrapolation will be applied for the first time on the Susitna River,many of the procedures,ana lyses,and criteri a for discriminating representative groups had to be develop~d. The objectives of this report are to:(1)introduce the concepts behind a new approach to extrapolation;(2)present the analyses and procedures used for 10 characterizing individual aquatic habitats (specific areas);(3)discuss the aquati c habitat characteri sti cs and associ ated cri teri a considered in the deve 1opment of representati ve groups ji and (4)present the representa ti ve glroups developed for use in the extrapolation of habitat availability "indices flrom modeled sites to nonmodeled areas of the middle Susitna River. - 11 ~---_._._-------------------""""-------------------- .... ..... ..... 2.INVESTIGATIVE FRAMEWORK The characterization of aquatic habitat can be approached from several per- spec:tives and performed at several levels of detail.To fulfill the objec- tives of the analysis,the investigative framework pursued in this report is founded on the resolution of aquatic habitat into three components:(1) hydr'ologic;(2)hydraulic;and (3)channel structure (see Figure 3).Aquatic habitat was resolved in this manner to:(1)provide focus to the development of analytical procedures;(2)organize the data base into a manageable format; and (3)be consistent with the framework established in previous studies. Two data sources were used primarily in the aquatic habitat characterization process:a s ite-specifi c habitat reconna i ssance data base and aeri a 1 photo- graphy.Additional information was incorporated into the analyses 'fro~the Alaska Department of Fish and Gamel s (AClF&G)habitat model ing program,ADF&G fish utilization studies,and personal communications withADF&G field person- nel. Five field trips provided the habitat reconnaissance data:a one-day trip on August 21,1984;a five-day trip SeptembE!r 3-7,1984;a five-day trip Septem- ber 10-14,1984;a four-day tri p SeptE!mber 29 -October 2,1984;and a thre1:-day trip July 23-25,1985.The corresponding U.S.Geological Survey (USGS)Gold Creek gage discharges were approximately 18000,11000, 10000, 8000,and 25000 cfs,respectively.The one-day field trip was a trial for the refinement of field procedures and the planning of future field work. Obsel"vers completed a habitat inventory form for each of 172 specific areas over the course of the two five-day field trips.During the four-day field 1 '~~- Aquatic Habitat .- .- Hydrologic Variables ~ •Water Source •Water Supply Compc)nents / Hydraulic Variables l •Energy Slope •Water Velocity •Water Depth •Substrate Size •Channel Morphology Channel Structure Variables, •Substrate Size •Cover Type •Percent Cover •Substrate Embeddedness •Channel Cross-Sectional Geometry •Streamside Vegetation Figure 3.Schematic of aquatic habitat components and descriptive variables investigated to characteri;~e aquatic habitats in the Tal keetna- to-Devil Canyon segment of the Susitna River. 13 _._----- - --trip additional information was collected to verify upwelling and side channel breaching flows as well as mean reach velocities and habitat transformation categories.The final field trip was used to confirm representative groupings .....of specific areas.A detailed explanation of field habitat inventory tech- niques appears in Appendix 2. S'lack and white aerial photography was available at discrete middle Susitna R'iver discharges of 5100,7400,9000,10600,12500,16000, 18000,23000,and .....26900 cubic feet per second (cfs),as measured at the USGS Gold Creek gaging station (Table 2).An additional set of aerial photography was available which showed winter ice conditions. Table 2.Black and white aerial photography used in the characterization of aquatic habitat. Mainstem Discharge (cfs)Date Taken Scale Comments ("~-- 150O-200O March 1983 1 in.=1,000 ft ice cover 5100 10-14-84 1 in.=250 ft open water 7400 10-04-84 1 in.=250 ft open water 9000 10-08-83 1 in.=1,000 ft some ice present 10600 09-09-84 1 in.=250 ft open water 12500 09-11-83 1 in.=1,000 ft open water 16000 09-06-83 1 in.=1,000 ft open water 18000 08-20-80 1 in.=1,000 ft open water 23000 06-01-82 1 in.=1,000 ft open water 26900 08-27-84 1 in.=1,000 ft open water Nearly all nonmainstem channel branches plus several mainstem channels were delinE!ated and labeled on aerial photo reproductions of the middle Susitna River (see Appendix 1).These specific areas,usually comprised of individual 14 -- -- s·ide channels,side sloughs,and upland sloughs,were used as a framework for the systematic evaluation of aquatic habitat.Occasionally a large side channel or slough was subdivided into two or more specific areas due to d'ifferences in habitat character.EaiCh specific area was referenced to a r'iver mile (RM)and the side of the main river channel looking upstream:left (L),right (R),or middle (M)if betwe,en two mainstem forks.A total of 172 specific areas were delineated,representing four of the six habitat types i <tentHi ed in the mi ddl e Sus itna Ri ver by Kl i nger and Tri hey (1984).These habitat types are described as follows: Mainstem hab ita ts a re those channels of the ri ver tha t convey rno re than approximately 10 percent of the total flow at a given site.During the open water season these channels are characterized as conveying water with high turbidity levels derived from glacial ml~ltwater. S1.:de ohannel habitats are those channel s of the ri ver that convey 1ess than approximately 10 percent of the total flow.During the open water season these channels generally convey highly turbid mainstem water. Side slough habitats contain clear water.Local surface water runoff and upwelling groundwater are the primary sources of water in these habitats. Side sloughs have nonvegetated berms at the upstream ends that are overtopped dLlrin~1 periods of moderate to high mainstem discharge.Once overtopped,side ~sloughs are tonsidered side channels. I 15 -- Upland sloughs are clearwater habitats that depend upon upwelling groundwater al1d/OI~local runoff for their water sources.The upstream ends of upland s']ougl1s are vegetated and are seldom overtopped by mainstem discharge. Tributary mouths are cl earwater habi talts at the confl uences of tributaries. In the summer these habitats are readily apparent as clearwater plumes that extend into the turbid glacial flow of the mainstem or a side channel.The s"ize of the plume is a function of both tributary discharge and mainstem d"ischarge.Tributary mouth habitats can also occur in the tributary channel as a result of mainstem stage causing a,backwater at the tributary mouth.If a backwater occurs,tributary mouth habitat extends into the tributary channel to the upstream extent of the backwater. TJ,:,ibutary habitats are reaches of tributary streams upstream of the tributary mouth habitats. Tl~ibutary habitats were not evaluated blecause they would not be affected by an altere!d mainstem flow regime.Neither If/ere tributary mouth habitats evaluated because they constitute a small portion of the middle Susitna River habitat and would not be affected significantly. Subhabitat types were required in this analysis to be consistent with the resolution provided by aerial photography and are as follows: Indistinct mainstem habitats occur at the margins of some mainstem channels. In thE!23000 cfs photography they appear to be an integral part of a mainstem habitalt.In photographs taken at lower flows,however,they are di sti nct 16 channels separated from the mainstem by gravel bars or are shallow expanses (shoa"ls)at the margins of a mainstem channel (Figure 4). Indistinct side channel habitats occur'at the margins of some mainstem and side channels.In the 23000 cfs photog raphy they appea I'to be an i nteg ra1 part of a mainstem or side channel halbitat.In photographs taken at lower f'lows!1 however,they are distinct channels separated from the mainstem or main s'ide channel by gravel bars or are shoals at the margins of the mainstem or s'ide channel.The primary distinction between indistinct mainstem and indistinct side channel habitats is flow volume as per the previous defini- t'ions of mainstem and side channel habitats. 2.1 HYDROLOGIC COMPONENT ..... The suitability of a given specific ar'ea as aquatic habitat is dependent on the quantity and quality of water supplied to the site.This hydrologic component of aquatic habitat was evaluated for each specific area using up to f'ive indices:(l)change of habitat type,or habitat transformation;(2) bl'eact\ing flow;(3)cross-sectional geometry of side channel head berms;(4) cl'oss-·secti ona 1 geometry of the rna i nstE~m;and (5)the presence or absence of upwell ing groundwater. 2 ..1.1 HABITAT TRANSFORMATION TRACKING The development of a methodology to examine changes in habitat in reference to-diischarge is a prerequisite to the assessment of the response of aquatic 17 .... .... """ Indistinct specific area 138.8R across from mouth habitat at Indian River at a main stem of 23000 cfs. Distinct specific area 138.8R across from tributa~y mouth habitat at Indian River at a mainstem discharge of 9000 cfs .... Figure 4.An indistinct mainstem channel that becomes a distinct side channel with decreasing mainstem discharge . 18 significant because they ..... habitat quality I transformations, to are mainstem flow.Changes in habitat, demonstrate or the habitat direct re!lationship between habitat type and quality and mainstem discharge.The :"""most common habitat transformation occUirs when a side channel becomes a side slough as mainstem stage recedes to a level that prevents the flow of turbid mainstem water through the side channel entrance.Another common - - - transformati on occurs when rna i nstem habi tat becomes si de channel habitat as mainstem discharge decreases. Eleven habitat transformation categories were defined to describe the types of habitat transformation that a specific area may undergo as mainstem discharge decreases from a higher reference flow to a lower evaluation flow (Table 3). These categories were used to systematically evaluate habitat transformations at spE~cific areas at successive mainstem discharges for which aerial photo- graphy was available. Methods Aerial Rhotography of the middle Susitna River for mainstem discharges of 5100,7400,9000,10600, 12500, 16000, 18000,and 23000 cfs was used in the analysis.Habitat transformations at each specific area were identified between 23000 cfs and lower evaluation flows through photo comparison,with the 23000 cfs aerial photography used as the reference flow for all lower flow photography.A flow chart for classifying the transformation of aquatic habitat types between two flows appears as Figure 5. 19 Table 3.Description of habitat transformation categories.* Category 0 ..- , Category 1 Category 2 Category 3 (hcr'sT~1)~~;!~Jr'ioeslou,9'!1'6gbhabitattype~t;the eV~luationfl~w. the evallJation flow throughout winter. the same .... Category 4 Category 5 Category 6 Category 7 Category 8 Category 9 Category 10 hie persists throughout winter. Any_.~_~~~'orconsists of isolated~pool"s"w'1tho'ut habitat value at the evaluation flow. -~~.'JlfJ1.*I;lial'~~~at theevaluationflow. *Habitats were based on a reference flow of 23000 cfs. 20 1 -I I I 1 1 J i ))J I i I'V t-" WETTED AREA OF SITE @ 23,000 CFS I I I CLEAR WATER TURBID WATER @ 23,000 CFS @ 23,000 CFS I I I Side Sloughs Distinct Channel Indistinct Channel (Shoals) Tributary Mouths Upland Sloughs @ 23,000 CFS @ 23,000 CFS 0 1 Dewatered @ 9,000 CFS 9 Clear Water Turbid Water Turbid Water Clear Water @ 9,000 CFS @ 9,000 CFS @ 9,000 CFS @ 9,000 CFS I I I I I J I With Apparent Without Apparent Side Channel Mainstem Become Distinct Remain Indistinct With Appa'rent Without Apparent Upwelling Upwelling (Less Ihan 10%Side Channels @ 9,000 Upwelling Upwelling of Flow)@ 9.000 2 3 4 10 5 6 7 8 Figure 5.Flow chart for classifying the trans~ormation of aquatic habitat types between two flows (Categories 0-10).It is important to note that habitat transformations can be monitored between any two flows of interest. ..... ",... ..... .- -- For example,consider specific area 139.5R (p.75).This specific area can be described as a broad,relatively shallow expanse of turbid water that is not a distinct channel (indistinct)at 23000 cfs.Comparison of the 23000 and 18000 cfs aerial photography reveals that specific area 139.5R persists as an indistinct turbid water channel at 18000 cfs.From Table 3 it would thus be· classified into habitat transformation category 6 at the 18000 cfs evaluation flow.This procedure can be repeated for each successively lower evaluation flow,always with reference to the 23000 cfs aerial photography.If this is done for specific area 139.5R for evaluation flows of 18000,16000,12500, 10600,9000,7400,and 5100 cfs,a habitat transformation category sequence of I6-6-6 J 5-5-7-7 will result.With reference to Table 3,this sequence indicates that specific area 139.5R is an indistinct channel at mainstem discharges of 12500 cfs and above,a well-defi ned channel at flows between 10600 and 9000 cfs,and side.slough habitat at flows between 7400 and 5100 cfs.For the purposes of thi s study,the habitat transformati on category sequence of a specific area can be abbreviated to display only the changes in habitat type that occur.For specific area 139.5R this would be 6-5-7.The habitat transformation category sequence is thus a concise reference of habitat types occurring at a specific area as well as a useful index of the site-specific hydrologic process. 2.1.2 BREACHING FLOW In addition to habitat transformation sequence,breaching flow is useful in describing and classifying specific arleas.It is the""'"';.~',.'-"',~,'i••,'..~:iil,>~ and also identifies the relative position of specific area habitats in the hydrologic spectrum between mainstem and upland slough (Figure 6). 22 BREACHING FLOW (CFS) HABITAT TYPE 1 """ UPLAND SLOUGH 35000 25000 SIDE SLOUGH 15000 ,.,..SIDE CHANNEL 5000 ~ r1AI NSTEM 1.refers to the habitat type that occurs most frequently at a specific area during the open water season.Actual habitat type at a specific area depends on mainstem discharge • ..... Figure 6.General relationship between breaching flow and habitat type in the Talkeetna-to-Devil Canyon segment of the Susitna River. 23 ..... I Breaching flow is defined as the mainstem discharge at which the water surface elevation (stage)in the main channel is sufficiently high to overtop the head berm of a peripheral channel and allow mainstem water to flow through the area.Not all specific areas have readily identifiable breaching flows,and some areas are breached gradually over ,a range of mainstem flow.For example, the overtopping of mainstem and side channel shoals is frequently a subtle process as water laterally inundates these areas with increasing stage.Water seldom overtops heads of upland sloughs because of their elevation relative to the mainstem,while mainstem channels are always breached. Methods The series of black and white aerial photography from 5100 to 26900 cfs was used as a visual reference frame for estimating breaching flows for specific areas.Breaching flows were interpolated between photographed flows using interpretive judgement and information provided by field observations where applicable.For example,if a specifiic area was breached in the 18000 cfs photography and nonbreached in the 16000 cfs photography,the breaching flow .-was estimated between these flows.Interpretive judgement as to IIhow ,-breached ll the area appeared in the 18000 cfs photography refined the breaching flow estimate.It was not possible to refine breaching flow estimates for specific areas that breached significantly below 5100 cfs because of the lack of available information.Some specif'ic areas appeared IIbarely breached ll in the 5100 cfs photography,and breaching flows slightly below 5100 cfs were estimated for those sites.Breaching flow estimates above 26900 cfs relied exclusively on available ADF&G field information. 24 r 2.1.3 CROSS-SECTIONAL GEOMETRY OF SIDE CHANNEL HEAD BERMS I Just as breaching flow is an index of flow frequency in a specific area,the cross-sectional geometry of the channel at the head berm determines the magnitude of flow at the site.Breaching flow and channel geometry might thus be considered an index of what would normally be termed climatic and basin characteristics in conventional basin hydrology.The significance of the cross-secti onal geometry at the head bl:!rm of channels in cl ass ifyi ng aquati c habitat can be summarized best by examining the hypothetical flow apportion- ment to two parallel channels with comparable breaching flows but different cross-sectional geometry (Figure 7).Note that for the same increase in stage at the head berm,a channel that is broad with gentle-sloping sides will receive more now than a channel with a relatively narrow cross-sectional geometry.The wetted surface area of the broad channel will likewise be - .- greater than that for the narrow channel,and will increase at a faster rate per incremental increase in stage.In short,the broad channel will provide more,but less stable,aquatic habitat per unit of mainstem stage than will the narrow channel.In a hydrologic sense,the broad channel would be termed responsive or perhaps,Ilflashy." Understanding the hydrology of individual channel branches is a prerequisite to the development of representative ~lroups.Towards this end,a study to identify the characteristic site-specific flow to mainstem discharge response associated with the cross-sectional gl20metry of middle Susitna River side channels was undertaken.Because of limitations in the aerial photo coverage of the middle Susitna River,it was not possible to study the cross-sectional geometry of every specific area.Instead,the objective was to develop a 25 J I J J .1 1 1 I )]1 I 1 1 d --=-FLAT~~~I !Co-.-.«>w d·· I- U W VI ~ VIo ~ LJ I -:;:I I , I I I I I I I , I I I I , I I I I , I I I I J TOP WIDTH (FT.) LEGEND Hater surface VI Z o-.-. 0:( ~ -l W -I«z:o-.-.uw VI I VI VIo5[ J J I 1 I t I I I , I I I • , ) I I I , , I 1 1 TOP WIDTH (FT.) Figure 7.Cross-sectional geometry at the head berm of two channels having the same breaching flow.Note how differences in cross-sectional geometry affects the rate of wetted surface area development for a comparable increase in mainstem stage, ,..., qualitative appreciation of the types and range of site flow response that could be expected at middle Susitna River specific areas.This information aids the subjective consideration of cross-sectional geometry in the develop- ment of representative groups. Methods The wetted top widths at the head berm of 46 distinct side channels were used in the analysis of channel cross-sectional geometry.The project team iden- tified the head berm for each channel using the 5100 cfs aerial photography, and wetted top width at the head berm cross section was measured at all photographed flows with a 40-division-per-inch scale.Top width versus mainstem discharge was then plotted for each channel and subjectively classified as steep,moderate,flat,or irregular,based on the characteristic slope. 2.1.4 CROSS-SECTIONAL GEOMETRY OF MAINSTEM An analysis of available cross-sectional geometry in the mainstem was per- formed in conjunction with the site-specific analysis of channel geometry. The rate of dJange in mainstem water'surface elevation to an incremental increase in discharge varies between mainstem reaches.A reach of the mainstem that is constricted will have a steeper stage/discharge relationship than one that is less confined.The effect on side channels adjacent to constricted areas is an increase in responsiveness of site flows to incre- mental changes in mainstem discharge.The opposite is true for side channels associated with reaches where the mainstem stage/discharge curve is flatter. 27 This analysis was undertaken to supplement the understanding of site flow response gained from the study of cross-sectional geometry of side channel head benl1s.The results will further aid the evaluation of the effects of cross-sectional geometry on specific aY'ea hydrology and will be considered in the development of representative groups. Methods Mainstem cross-sectional data from R&M Consultants (1982).was analyzed over a stage increase from 9700 to 23400 cfs at selected cross sections distributed throughout the middle Susitna River.The difference between the 9700 and .23400 cfs water surface elevations at each section was scaled and the resul- tant stage increase was recorded in feet. 2.1.5 EVALUATION OF UPWELLING The presence of an upwelling groundwater source that persists through winter is the most important habitat variable influencing the selection of spawning areas by chum salmon (Q.keta)(Estes clnd Vincent-Lang 1984).Upwelling also has a positive influence on the success of overwintering juvenile chinook ""'"salmon as well as on egg-to-fry survival for chum salmon (Vining et al.1985). Methods The project team examined each specific area in the winter photography for the presence or absence of open leads in the ice cover.While open leads can be 28 caused by high velocities,it was assumed that leads were caused by the heat of upwelling groundwater.The presence of clear water in the 5100 cfs photo- graphy also suggested upwelling in many areas. Field observers made on-site evaluations at each specific area.In clearwater areas,upwellintg was indicated visually by the presence of small volcano-like structures in the substrate caused by upwelling flow.The presence of upwell- ing was difficult to determine in most breached areas because the turbidity restricted visibility.Upwelling in these specific areas was determined primarily by the evaluation of aerial photography.Site visits provided the-opportunity to evaluate whether open lleads visible in the winter photography were caused by velocity or groundwater upwellings. 2.2 HYDRAULIC COMPONENT -While the hydrologic component of an aquatic habitat may indicate favorable conditions for fish,the site's suitability for fish may be limited by hydraulic,or ,energy-related,conditions,such as high velocities.Three indices of hydr'aulic energy were used in characterizing specific areas for this report:(1)estimated and measured mean reach velocity;(2)dominant bed material size;and (3)channel morphology.While slope is the conventional index of the rate of energy required to move water and sediments downstream in an open channel,due to the large number of side channels,it was impractical to determine the slope of each channel by differential leveling.Therefore, these particular indices were chosen. 29 _______________,-.--=_=...._=_,_.-I>t --_ ..... 2.2.1 r~EAN REACH VELOCITY In the hydraul i c component.mean reach velocity offers the best estimate of channel slope with the additional advantage of being a significant index of habitat quality.The weakness of mean reach velocity as an index of slope. however.is its dependence on flow.A comparison of mean reach velocities of several individual channels,therefore,is meaningful only if the relationship between mean reach velocity.site-specHic discharge.and mainstem discharge is understood.Generally,it is necessary to collect mean reach velocity data at several mai nstem and si te-specifi c di scharges to adequately describe thi s relationship.However,site-specific breaching flow defines the highest mainstem flow in which site-specific discharge and mean reach velocity have a magni tude of approximately zero.Breachi ng flows can thus be used to norma 1- ize mean reach velocity values with respect to mainstem discharge and provide a basis for comparing velocities of specific areas that have different breachi ng flows .. Other variables,such as differences in channel bed roughness (n,dimension- less)and hydraul ic radius (R.in fleet)affect the relationship between velocity (V.in feet per second (fps).and channel bed slope (5,in feet per feet).Channel bed roughness is an emp"irical energy loss coefficient.and the hydraulic radius is a function of stage and channel cross-sectional geometry, although for wiide channels it is efflectively dependent on depth of flow. Manning ' s Equatiion relates the variables as follows: 30 ..... ..... Mean reach velocities used in conjunction with corroborating evidence,such as substrate size and channel morphology,reveal much about channel hydraulics. Methods Three methods were used to determi ne mean reach vel oci ty.The fi rst method involved estimating the surface velocity by recording the time it took a floating object to travel a known distance.The mean reach velocity was estimated as 85 percent of this surface velocity (Linsley and Franzini 1979). The second method involved measuring the height (h)that water II c limbed ll a survey rod held perpendicular to the flow (i.e.,potential head).The relationship bE~tween h and mean reaclh velocity is depicted in Figure 8. Tabulated values of velocity corresponding with particular heights appear in Table 4.On rare occasions,a Marsh McBirney Type 201 portable current meter with wading rod was used to measure velocity.Velocity was measured at a point 0.6 times the depth from the water surface elevation for depths less than or equal to 2.5 ft.Velocity was determined as the average of measurements made at 0.2 and 0.8 times the depth from the water surface elevation for depths greater than 2.5 ft.The t~arsh McBirney was used primarily to check the accuracy of the two approximate methods of estimating mean reach velocities. 2.2.2 SUBSTRATIE SIZE Substrate,or bed material size,is also related to channel slope,as can be deduced from tnl.ctive force theory (Chm'J 1959): 31 ---_._-------_._-------------~n=pm-------- ..... I v =J 2gh g =32.2 ft/sec 2 h =height in feet (ft) water level ------~~-_.----- flow direction Figure 8.The relationship between height (h)and mean reach velocity as depicted by the rise of the water column against a staff held perpendicular to the flow. Table 4.The relationship between the height (h)that water climbs a staff ~~hen held perpendicular to the flow and mean reach velocity. Height (ft)Velocity (fps)Height (ft)Velocity (fps) -0.01 0.8 0.14 3.0 0.02 1.1 0.15 3.1 0.03 1.4 0.15 3.2.....0.04 1.6 0.17 3.3! I 0.05 1.8 0.18 3.4 0.06 2.0 0.19 3.5 ~0.07 2.1 0.20 3.6 0.08 2.3 0.21 3.7 0.09 2.4 0.22 3.8 0.10 2.5 0.24 3.9 0.11 2.6 0.26 4.1 0.12 2.8 0.28 4.2 0.13 2.9 0.30 4.4 r 32 .... tc ='6 YS where tc =tractive force,pounds per square foot (psf) I =unit weight of water,pounds per cubic foot (pcf) Y =depth (ft) S =energy slope (ft/ft) Tractive force is the force that water exerts on the channel bed.The threshold size of bed material that can be moved is directly proportional to tc. ~~here tc =d s (~s -~)Fs (Shields 1936) ds =particle s'ize (ft) Os =specific wl~ight of sediment (pcf) Fs =dimensionless shear stress Bed material sizes larger than the threshold size associated with a typical -high flow event would theoretically makl~up the substrate • ..... The elevation,configuration,and ori entati on of head berms strongly affect the composition and size range of sediments delivered by mainstem flow into side channel areas.Local geology and alluvial deposits also influence the substrate compos iti on of si de channel beds.Smaller suspended sediments, skimmed from th~~upper portion of the mainstem water column,tend to dominate the sediment load entering side channels. Despite these considerations,characteristic bed material size can be useful in the assessment of available energy in individual channels.Large substrate would suggest a steep channel gradient,whereas accumulation of fine substrate 33 ,---~------~~-------------------- in side channe~ls and side sloughs is indicative of a mild (or low energy) channel slope. -Methods Field observers coded the characteristic size of the bed materials of a specific area IIJsing methods and codes described in Estes·and Vincent-Lang (1984).Frequently,more than one code was selected because of the evenly balanced mixture of fine and coarse substrate size classes at many specific areas.The substrate type and corresponding code numbers are presented in ~ Appendix 2. 2.2.3 CHANNEL MORPHOLOGY Channel morphology is the least direct index of instream hydraulics considered in the analysis.The rationale for its use is that since the form of a river is a function of river processes,river reaches undergoing similar processes would be expected to display similar form.There is little precedent in the 1 iterature concerning the relationships between conventional morphological indices of rivE~r form,such as sinuosity or radius of curvature,and site- specific characteristics of individual side channels in a split channel or braided river such as the Susitna.Nonetheless,careful inspection of aerial photography reveals considerable evidence of repetitive form throughout the middle Susitna River. Specific areas may be grouped subjectively and through statistical analyses that focus on correlating the morphologic variables that comprise the plan -34 form of an area (such as channel length,channel width,and channel sinuosity).St,atistics may also be applied to identify the variable that most strongly defines each group.In this study,statistics were used to corrobo- ~rate subjective groupings of specific areas based on channel morphology. Methods - Plan form analysis of each distinct side channel entailed measurement of selected physical parameters,such as angular orientation to the mainstem, total length,straight line length from channel head to mouth,and representa- tive bankfull top width.Length and width were measured using a Numonics Corporation Electronic Graphics Calculator and Model 2400 Digi Tablet from aerial photographs that had been enlarged to a scale of 1 inch =250 feet. Orientation angle was determined by drawing two lines,one parallel to the mainstem flow,and one parallel to the flow of the side channel near the head. The inside angle formed by these lines Iwas measured using a protractor. Sinuosity was calculated for each specific area as the ratio of total channel length to straight-line length between channel head and mouth.A straight- line channel has a 1:1 ratio.This ratio increases with increased sinuousity. Channel length-to-width ratios were also calculated for each specific area. ~OllOWing 'groups of variables were subject to cluster analysis using Ward's method:length,width,length-to-width ratio,sinuosity,and number of bends.These iinalyses were followed by a discriminant analysis using the direct entry mE!thod.The number of cases (specific areas)utilized in the analysis was limited to 70 distinct side channels. -35 ----------_-.-."M------.----....,~-----------.-------- ..... - ..... ..... - Cluster analysis is undertaken to sort cases into groups such that the degree of association is high between member's of the same group and low between members of different groups (Wi shart 1978).'Seven cl usteri ng methods are available from the SPSS-X package (Statistical Procedures for the Social Sciences -Vers·ion X):Between groups ,average,within groups average,single, complete,centroid,median,and Ward.Of these seven methods,Wishart (1978) considers Wardls method the best method for finding minimal variance spherical clusters.Wardi's method was used in this study to identify groups of specific areas that are morphologically similar.Once well-defined clusters are formed from a cluster analysis,it is possible to determine which variables con- tribute most to their separation.A suitable approach is to set up discrimi- nate functions using a multiple-discriminant analysis.The weighting coefficients (standardized discriminant functipn coefficients)for each of the variables identHythose which contribute most to the separation of the groups along each respective function (Klecka 1975).Numerical values give the percentage varicinces that are accounted for by each function.Signs for the coefficients indicate whether the variables are positively or negatively correlated.Multiple discriminant function analysis was used in this study to identify the most important variables for the discrimination of morphologically similar groups. 2.3 STRUCTURAL COMPONENT While site-specHic hydrologic and hydY'aulic indices are a ratiofial approach to defining representativeness in terms of instream hydraulics,the structural component is ne€!ded to consider the variation in aquatic habitat quality that 36 ..... .... results from dlifferences in nonhydrau1ic attributes between specific areas. This component is defined as the physical formation of the channel bed,which includes vegetation,debris,deadfall,sediments,etc.The evaluation of structural COVE!r is an important habitat component influencing the dis- tribution of juvenile salmon (Reiser and Bjornn 1979>,and therefore is a prerequisite to the development of habitat assessments. In the IFIM,the structural component lis typically described and incorporated into the analysis using a number of substrate and cover codes depending on the species/life stage and river system undler study.In the middle Susitna River, cover codes developed by ADF&G (Suchanek et a1.1984)were used to describe structural cover at study areas.CoveY'suitability data for juvenile chinook salmon were then used to develop weighting factors for the evaluation of the relative contrilbution to overall habitat quality of the various cover types. By combining structural habitat weighting factors with hydrologic and hydrau- lic input,a comprehensive physical habitat simulation model was developed for each study area .. Structural variables such as debris,deadfall,boulder,and vegetative cover are frequently the result of localized conditions within a river corridor, such as those of topography,soils,geology,or channel morphology.Bed material size may also vary from one r'each to another,even within areas of relatively uniform channel gradient (de Leeuw 1981).In a multiple-thread river system such as the Susitna,structural diversity is increased because of differences between channel branches.Braided river channel branches are of 37 ----------..,..,.._._._.----------------- ..... variable size and habitat character depending on local conditions and their relative position in the river's geomorphic regime.Where a single-thread river will often show characteristics of increased'geographic maturity as one moves from the headwaters to its mouth (Lane 1955),a braided river w.ill display longitudinal and lateral variation in age characteristics as channel migration leaves a history of remnant,peripheral,and mainstem channels along the same cross section • 2.3.1 STRUCTURAL HABITAT INDEX To extrapolate habitat modeling results from study areas,the association of channel branches of a common geomorphic regime into representative groups significantly reduces the hydrologic,hydraulic,and morphologic disparity between portions of the river.However,field observations substantiate the expectation that,due to spatial variation,similar channel branches display a certain amount of structural di versi ty withi n the same representati ve group according to local conditions (e.g.,topographic,geologic,morphologic, etc.).Consequently,a means was devised by use of a structural habitat index (SHI)to comparatively evaluate and weight the structural habitat quality of each specific area within each representative group.With this index, extrapolation of modeling results can be done within representative groups from modeled specific areas to nonmodE!led specific areas with an adjustment for differences in structural habitat quality. 38 _________.....r~'~r_----=------~---------_ The basic premise behind the concept of the structural habitat index is simple.If two channels have comparable hydraulics and hydrology and different habitat values,the difference in habitat value must be attributed to differences in channel structure.Outwardly,this is a simplistic con- clusion which does not address the possible effects of differences in water quality,nutrient loading,site location,and other environmental variables. However,when ct judicious evaluation 'is made between sites within the same stream subsegment,many of these variables can be considered constant,or of secondary,or even minor,importance. Methods Structura 1 habitat i ndi ces (SHI)reprE~sent the synthesi s of si x structural -habitat variables into a single value:dominant cover;percent cover;sub- strate si ze;substrate embeddedness;channel cross-secti ona 1 geometry;and.... streamside vegetation.The procedure to deri ve structural habitat i ndi ces involves three steps:(1)rating the affect of each variable on juvenile chinook salmon habitat quality for each specific area;(2)ranking the rela- tive importance of each variable to juvenile chinook salmon habitat quality; and (3)combining rating and weighting factors into a structural habitat index for each specific area.An explanation of each step follows. Informati on obtai ned from habitat inventory and aeri a1 photo procedures was the basis for rating each structural habitat variable.The precision of this information permitted the rating of each variable into the following categories:excellent,good,fair,poor,and nonexistent.These rating 39 - categories were assigned numerical values of 1.0,0.75,0.50,0.25,and 0.0, respectively. Dominant cover and percent cover were rated as a variable combination to allow for the use of ADF&G clearwater cover suitabil ity criteria for juvenile chinook salmon in the rating process (Table 5).Clearwater criteria were selected rather than turbid water criteria because of their independence from the influence of turbidity as a cover variable.The clearwater criteria were thus assumed to be more directly related to structural cover as described by domi nant cover and percent cover codes (see Appendi x 2).Juvenil e chi nook salmon criteria were used because they are a primary evaluation species in middle Susitna River instream flow studies (E.Woody Trihey &Associates and Woodward-Clyde Consultants,1985). Table 5.Cover suitability criteria recommended!for use in modeling juvenile chinook habitat ~under clei3rwater conditions in the Susitna River (Schmidt et al.1984)• COVER TYPE Cobble or Percent No Emergent Aquatic Large Rubble Boulders Debris &Overhanging Undercut Cover Cover Veg.Veg.Gravel 3"'-5"5"Deadfall Riparian Banks Clear Water (ADF&G) P"'"'0-5'0.01 0.01 0.07 0.07 0.09 0.09 0.11 0.06 0.10 6-25%0.01 0.04 0.22 0.21 0.27 0.29 0.33 0.20 0.32 26-50%0.01 0.07 0.38 0.35 0.45 0.49 0.56 0.34 0.54 51-75%0.01 0.09 0.53 0.49 0.63 0.69 0.78 0.47 0.75 76-100%0.01 0.12 0.68 0.63 0.81 0.89 1.00 0.61 0.97 40 "The suitability criteria for'cover ",/ere rated by dividing the range of suitability index values into discrete intervals,each corresponding to a rating factor,as follows:0.0 (nonexistent),0.01-0.10 (poor),0.11-0.30 (fair),0.31-0.50 (good),and 0.51-1.0 (excellent).The professional judge- ment of EWT&A and AEIDC staff biologists was used to establish these intervals.The rating factors for dominant cover and percent cover codes for each specific area were obtained by clalssifying the corresponding suitability index into one of the above intervals.A matrix of dominant cover and percent cover rating factors appears as Table 6. Channe 1 cross-sectional geometry was evaluated as a structural habitat va ri- able on the bas~is of the approximate proportions in which three general types I"""of channel cross-secti ana 1 geometry were represented at each speci fi c area. The three cross-·sectional types are as follows:(l)broad cross sections with gentle-sloping banks;(2)cross sections with one gentle-sloping bank and one steep bank;and (3)cross sections that are incised with two steep banks.The fi rst cross-secti ona 1 geometry type has a pas iti ve carrel ati on with habitat .....41--v_~..,...._~, ijj!Wlll, availability fOI'"juvenile chinook salmon by providing proportionately larger areas along channel margins where edge effects retard velocities to suitable levels.Velocity suitability criteria for juvenile chinook indicate that suitability decreases as velocities become greater than 0.35 fps for turbid conditions and 0.65 fps for clearwater conditions (Suchanek et al.1984). Cross-sectional geometry with one gentle-sloping bank was rated half as valuable as cross-sectional geometry with two gentle-sloping banks.Incised cross-secti ana 1 geometry wi th steep banks received a zero rating factor. -Streambank slope!codes (see"Appendix 2)and aerial photo interpretation were used to evaluate the cross-sectional geometry of each specific area.Pro- portions for the three types of channel cross-sectional geometry were allo- cated into the following categories with the sum for a given specific area to equal 1.0:0,0.25,0.50,0.75,and 1.00.Table 7 lists rating factors for .-the various combinations of cross-sectional geometry types that could be represented at a specific area . ..... Table 7.Channel cross-sectional geometry rating factors for the various combinations of cross·sectional geometry types that could be represented at a specific area. Channel Cross· secti onal Ceometry Type Proportion of Cross-sectional Ceometry Type 2 gentle- sloping sides 1 gentle- sloping side 2 steep sides 1.00 0.75 0.75 0.50 0.50 0.25 0.00 0.50 0.25 0.25 0.00 0.25 0.00 0.00 0.00 0.25 0.00 0.50 0.25 0.75 1.00 0.00 0.50 0.25 0.75 0.00 0.25 0.00 0.00 0.00 0.25 0.00 0.25 0.00 0.00 0.50 0.25 0.50 0.25 0.75 0.75 1.00 =---========:======---======-----==========--=========== Rating Factor 1.00 1.00 0.75 0.75 0.75 0.75 0.50 0.50 0.50 0.50 0.50 0.25 0.25 0.00 42 :tW7M;;;t=taw_ .... .... ,~ - The channel cross-sectional geometry rating factors assume that velocities I prohibitive to juvenile chinook salmon occur in the primary flow corridor of each specific area.While this is trUE!for the preponderance of side channel habitats during breached conditions in the middle Susitna Rive.r,it is not true for upland sloughs and side channel habitats that are nonbreached.For this reason,upland slough habitats,which seldom have velocities that are prohibitive to juvenile chinook,WerE!all rated as excellent for channel cross-sectional geometry.This e1im"inated cross-sectional geometry as a di scriminating factor of structural halbitat qual ity between up1 and sloughs. Side channel hi~bitats were evaluated for breached conditions only,when it could be assumed that cross-sectioncl1 geometry was correlated with the availability of channel margin habitats possessing suitable velocity for juvenile chinook salmon.The nonbreached phase of side channel habitats (side slough habitat)is less heavily utilized by juvenile chinook salmon (Schmidt et a 1.1984)• Substrate size and substrate embeddedness are important descriptors of the predominant constituent of a channel's bed material.Suitability criteria indicate that increased substrate siz.e increases cover va 1ue for juvenile chinook (Stewar'd 1985)by providing larger velocity breaks and more inter- stiti a1 space for refuge.Substrate embeddedness,whi ch imp1 i es a 1a rge streambed elemE!nt partially buried in a finer substrate material,has an inverse relationship to structural habitat quality.In the middle Susitna River,sand and silt are widely distributed and frequently fill a portion of the interstitial space between coarse substrate size classes.This reduces theinterstitia.l space available for occupancy by juvenile chinook and,in heavily embedded areas,smooths the streambed,eliminating velocity breaks and increasing flow velocity. 43 ~__•m~",••m.....,z,~-----_ Substrate size and embeddedness were coded in the field (see Appendix 2)and rated as a variable combination.Ratin9 values similar to suitability factors for the cover variable combination of substrate size/percent cover reported by Steway'd (1985)were incorporated into a.rating table (see Table 8).Differ- ences between the rating table for substrate size/embeddedness and substrate size/percent cover i ncl ude the incorporati on of more substrate si ze cl asses into the former.Bed material in side channels of the middle Susitna River varies in size from silt to boulders and it was essential to describe substrate character as accurately as possible.Suitability factors for substr'ate size/percent cover include only three size classes:large gravel (1-3"),rubble (3-5 11 ),and cobble/bouldE:r (>5 11 ).Rating factors for substrate size classes finer than large gravel were derived based on field experience, professional judgement,and interpretation of the trends of coarser substrate size suitability factors. Table 8.Substrate si ze/substrate embeddedness ri~ti ng factors. Substrate Substrate Size Code Embeddedness COd4~2 3 4 5 6 7 8 9 10 11 12 13 1 0.00 0.00 0.00 0.00 0.00 0.25 0.25 0.25 0.50 0.50 0.50 0.50 0.50 2 0.00 0.00 0.00 0.00 0.25 0.25 0.25 0.50 0.50 0.75 0.75 1.00 1.00 3 0.00 0.00 0.00 0.25 0.25 0.50 0.75 0.75 1.00 1.00 1.00 1.00 1.00 Stream~ide vegetation codes (see Appendix 2)and aerial photography were used to evaluate the extensiveness of streamside vegetation for each specific area. Channel width was also considered in the evaluation of rating factors because the relative effect of streamside vegetation on overall channel habitat 44 - quality is a function of width.Streamside vegetation as a structural habitat variable affects shading,terrestrial insect import,and bank stability. Vegetcltion as a cover parameter is included in the dominant cover coding discussed earlier.The rationale behind the assignment of rating factors is reflected in Table 9.Actual ratings of streamside vegetation were assessed for each specific area based on professional judgement. Table 9.Streamside vegetation rating factor. Rati ng Factor Narrow Channel/Extensive Vegetation Moderate Channel Width/Extensive Vegetation Moderate Channel Width/Moderate Vegetation Wide Channel/Extensive Vegetation Wide Channel/Moderate Vegetation 1.00 0.75 0.50 0.25 0.00 ..... After each structural habitat variable/variable combination was rated,it was necessary to weight the relative importance of each variable/variable com- bination to overall structural habitat quality.As there is a negligible amount of information in the literature pertaining to weighting schemes of habitat variables,development of the clriteria to accomplish this task was not straightforward.Hynes (1970)notes that it is generally recognized that temperature,water quality,water depth and velocity,cover or shelter,and streambed material are the most important physical variables affecting the amount or quality of riverine fish habitat.Gorman and Karr (1978)suggest that three physical habitat variables are important in the microhabitat specialization of stream fishes;thesle are substrate,depth,and current. Binns and Eiserman (1979)included cover,stream width,bank stability,and 45 .... substrate among nine habitat attributes used in a regression model developed "to predict trout standing crop in Wyoming streams.In the final analysis,the criterion used to weight the relativE!importance of the habitat variable/ variable combinations on overall structural habitat quality for juvenile chinook salmon was that of corroboration between resulting structural habitat i ndi CE!S and subjective habitat quality eva 1uati ons recorded on habitat i nven- tory field forms.This corroboration was satisfied by the following weighting cover/percent cover (0.45);(2)channe'J cross-sectional geometry (0.30);(3) dominatnt substrate size/substrate embeddedness (0.20);and (4)streamside vegetation (0.05).A summary of the weighting factors for each variable/ -scheme for the respective variable/variable combinations:(1)dominant .... variable combination appears as Table 10. Table 10.Structural habitat variables and their corresponding weighting factors and order of importance . Habitat Variable Dominant Cover/Percent Cover Channel Cross-Sectional Geometry Substrate Size/Substrate Embeddedness Streamside Vegetation Weighting Factor 0.45 0.30 0.20 0.05 .... Rati ng and wei ghti ng factors were combi ned ina matrix that provi ded a con- venient form for evaluating structural habitat indices.For example,consider specific area 136.0L.This specific area is a small side channel with a domi nant cover code of 7,percent COVE!r code of 2,cross-secti ana 1 geometry described as 75 percent 2 steep sides,l~5 percent 1 steep side,substrate size 46 """ code of 8,and a substrate embeddedness code of 2.Streamside vegetation was judged to be fair.From Table 6,dominant cover/percent cover receives a ratinl~of good.Channel cross-sectioni~l geometry is rated as poor (Table 7) and substrate size/substrate embeddednl~ss is rated fair (Table 8).Figure 9 demonstrates the use of the structural habitat index form to combine rating and wl~ighting factors into a SHI value for specific area 136.0L.This process was repeated for all 172 specific arleas inventoried in the middle Susitna River .. 47 Habitat Variable/Variable Combination (Weighting Factor) Affect on Habitat Quality (Rating Factor) Dominant Cover/Percent Cover (0.45) Channel Geometry (0.30) Substrate Size/ Substrate Streamside Embeddedness Vegetation (0.20) (0.05) EXCE!ll ent Good Fair Poor' None~x is tent (1.00) (0.75) (0.50) (0.25) (0.0) J1,.30 .20 .05 .23 .15 .04 .23 15 ~(Q]) .11 ~.05 .01 .0 .0 .0 .0 -============================================================================== Product of rating and wei9 hting factors . SHI =.55 .34 .08 .10 .03 _Figure 9.Structural habitat index form for specific area 136.0L. 48 - .... .".,. ...... ..... 3.RESULTS AND DISCUSSION Results and discussion pertaining to the characterization of each aquatic habitat component is presented {n this section in the order of their develop- ment:hydrologic,hydraulic,and structural.The application of these habitat characterizations to the development of structural habitat indices and representative groups will follow. 3.1 HYDROLOGIC COMPONENT Of thle five indices used to describe the hydrology of specific areas (Section 2.1),habitat transformation,breaching flow,and upwelling were the most useful for characterizing aquatic habitat • 3.1.1 HABITAT TRANSFORMATION TRACKING The results from the habitat transformation monitoring methodology appear in Appendi x 3 where habitat transformati on categori es for each speci fi c area betwelen the reference flow of 23000 cfs and all lower f1 ow aeri a 1 photography are listed.From the results,the number of specific areas in each habitat transformation category was tabulated for each evaluation flow (Table 11). Table 11 and Figure 10 illustrate how the quantity of riverine habitats in the middlle Susitna River change significantly as mainstem discharge decreases. For a discussion of the qualitative a.spects of the change in habitats,see Section 3.2.1,Mean Reach Velocity.The number of clearwater habitats with breaching flows greater than 35000 cfs (Category 1)is relatively stable throu'9hout the flow range.There is a substantial increase in the number of 49 side channels that transform to sloughs as mainstem discharge decreases -(Categiory 2)and a correspondi ng decr'ease in the number of side channels (Categ:ory 4).As can be expected,the number of indistinct areas (Category 6) and mainstem areas (Category 10)also decrease.The number of areas that dewate~r (Category 9)showed the most dramatic change,with a fivefold increase betwee~n the highest and lowest flows.The number of areas described by the remaining categories (Categories 3,5,7,and 8)fluctuate over the flow range considered,but collectively account for only 10 to 20 percent of the 172 specific areas evaluated. "'~ Table II.Number of specifi c areas i n e~ach habitat transformation category by evaluation mainstem flow,referenced to 23000 cfs. Evaluation Mainstem Q (cfs) Ii- 18000 16000 12500 10600 9000 7400 5100 Category Number of Specific Areas 1 35 34 33 33 33 32 32 2 12 14 19 24 _27 30 30 3 7 6 8 8 11 10 13 ~.4 48 46 40 35 26 24 24 5 5 6 8 11 13 11 11 6 33 32 28 22 18 18 15 7 3 3 3 3 3 4 5 8 3 3 5 7·8 5 4 9 6 8 13 14 20 27 30 10 20 20 15 15 13 11 8- It is interesting to note that the number of dewatered specific areas remains relatively stable between mainstem disc:harges of 12500 and 10600 cfs (13 and 14,rE!spectively),but then almost doulbles with a reduction in discharge to 7400 c:fs (27).An accelerated change in overall riverine habitat character appea y's to occu r between 10600 and 7400 cfs. 50 CATEGORY 1 SPECIFIC AREAS CATEGORY 2 SPECIFIC AREAS •• ..... ..... ..... Ul'UllD AIIlI stllZ 5LOIlClI5 • • • • • CATEGORY 3 SPECTFIC AREAS ....'l'Itrrte ...•r---';"'~-------------------...., SIIlE ClWlMtLS TO 511l£5LOUCRS IIlTIIDUT IIllltD III'V!LI.IllC • • :II • w .....- CATEGORY 5 SPECIFIC AREAS SIIlE CIW<lIlLS TO StilE 5tDUCH5 II'lTB IIlIfTD.IJ!'\o/tt.LlMC • • " • • w'"""'_ CATEGORY 4 SPECIFIC AREAS •r-=.·::....:."":.:":.::I(:...:.....=...., stilE ClWlHtLS • • :II w CATEGORY 6 SPECIFTC AREAS w r......-·~....;.;~"-"~......:..:.._------------------..,• - llllllSllMCT SIIl£CIWIN!LS to 01Sltllcr SlllZ C1WfIlELS " • L'<tl15TlMet !l.\IH5Ttl1 ....'«1 511)£Cll......INa.AUAS • • -- 11 • .. " • .. .... Figure 10.Number of specific areas in each habitat transformation category at various mainstem flows . 51 _________________!fl ~~_ ~(--- CATEGORY 7 SPECIFIC AREAS •;_=.:~.::::9'lt::,::,:Tl'R:~:=.uos=---,.. CATEGORY a SPECIFIC AREAS IIIIIlSTL'lCT SlOt CIIAIIIIELS to SlOt SLOllCIIS \11TH IlllltU UPIItLI.nG • • ,. II II 11 INDIS'I!!IC'I SlOt CIIAIIIIELS to SlOt Sl.OUCHS \/ITllOtn'\Il!l'l:tIl UP\IELLIlIC ---....,.. -- .. CATEGORY 9 SPECIFIC AREAS • CATEGORY 10 SPECIFIC AREAS " • S:PItCIFtC AUAS 'tIlA'I Dtl/ATEK " • lIAIIIS'l'EIl CIIAIIIIELS II 1II I. ,...'OID -..II1II11_....,.. 11 1II I. Figure 10 (Continued). !32 - KlingE!r and Trihey (1984)observed similar trends in the overall habitat character as flows decrease.They uSl~d wetted surface area as an index of habitat quanti ty and determined that as mai nstem di scharge decreases from 23000 to 9000 cfs,there was an associated decrease in mainstem habitat (from 3737 to 2399 acres)and side channel habitat (from 1241 to 762 acres)and an increase in side slough habitat (from 53 to 156 acres).The wetted surface area of upland slough habitat was relatively stable within this flow range. 3.1.2 BREACHING FLOW Breaching flows were determined with a precision of approximately ±1500 cfs within the flow range from 5100 to 18000 cfs,and ±2500 cfs above 18000 cfs and below 5100 cfs.Breaching flows for each specific area are listed in Appendix 4. 3.1.3 CROSS-SECTIONAL GEOMETRY OF SIDE CHANNEL HEAD BERMS Plots of wetted top width at the head berm versus mainstem discharge were r developed for 46 specific area channl~ls that had low breaching flows and readi"ly identifiable head berms.These were classified by curve slope into..... four categories:(1)steep;(2)moderate;(3)flat;and (4)irregular (Figul"e 11).The interpretation of each category of curve slope ;s as fall O\'IS: .....(1)steep slopes are indicative of broad channel sections with rela- tively gentle-sloped sides at the head berm; 53 .-. 130.2 R 129.3 L ~11"',".llIr----------------------------...... IlIIIl1II1II- II III I. ..'(D1M iFt.,J 1I .. 1I 0 ~C'-l II X .....It IDJl llllD •Il1S.l STEEP MODERATE 127.0 N 128.5 R TrP'Ilonr CrT.)lIr~~------------------.....,trrflD:IMif'U 1I .. II-0.....N III X I. 1Il 10 _/ !t !,I I I t• I lIIIl lllDl IlIIIl !1 , Il1D1 IDJl llllD •Il1S.l FLAT IRREGULAR .... Figure 11.Representative wetted top width versus discharge plots for each category of curve slope. 54 - - (2)moderate slopes are indicative of channels with cross-sectional geometry at the head berm tlhat is gentle-sloped on one side and steep on the other; (3)flat slopes are indicative of channels where cross-sectional geo- metry at the head berm has stE~ep-sloping sides;and (4)irregular or stepped curves are indicative of channels with irregular cross-sectional geometry at the head berm. Of thE!46 side channels studied in th'is section,21 (46%)had curve slopes that were flat,11 (24%)moderate,8 (l7%)irregular,and 6 (13%)steep (Table 12).Generally,mainstem and large side channels had flat curve slopes characteristic of steep-sided channels.There was also a tendency for the large channels with breaching flows be-tween 8000 and 16000 cfs to be broad .- with gentle-sloping sides. - From Table 12,it is apparent that each curve slope class is distributed throughout the middle Susitna River.No longitudinal trends were observed for consideration in grouping specific areas.Although no consistent trends were identified from the data,the study provided insights useful in the subjective consideration of cross-sectional geometry as a criterion for the development of representative groups • .... 55 Table 12.Curve slope classes of plots of wetted top width versus discharge from measurements made at channel head berms at 46 specific areas in the Talkeetna-to-Devil Canyon segment of the Susitna River. - - Specific Area 100.6L 100.?R 101.:~R 101.!jL 102.6L 105.~7R 106.:3R 108.n 108.9L 109.4M 110.8M 111.OR l11.!jR 112.6L 114.0R 115.OR 116.BR 117.n 117.BL 119.:~R 119.6L 121.1L 121.?R Curve Slope Class 3 2 2 2 4 4 4 3 2 3 3 3 3 1 3 1 4 3 2 2 3 2 3 Specific Area 123.0L 124.1L 125.2R 125.6L 127.0M 127.1M 127.4L 128.5R 129.3L 130.2R 130.2L 131.7L 132.6L 134.9R 135.0L 136.0L 137.2R 138.0L 138.8R 139.4L 139.6L 144.2L 145.3R Curve Slope Class 3 3 3 2 3 4 2 4 2 1 3 4 3 3 3 3 1 1 1 4 3 3 2 -Curve slope classes:1 =steep,2 =moderate,3 =flat,4 =irregular 3.1.4 CROSS-SECTIONAL GEOMETRY OF MAINSTEM The increase in mainstem stage due to an increase in mainstem discharge varies betwel~n mainstem reaches of the middle Susitna River (Table 13).The respon- siveness of mainstem stage to discharge in a reach has a direct influence on the hydrologic regimen of adjacent side channels.In reaches where mainstem stage is .relatively responsive to changing discharge,the volume of flow entering adjacent side channels will be relatively unstable.The opposite is 56 true in reaches where mainstem stage responds less dynamically to changing discharge.From the information in Table 13,it would be expected that side channel habitats within the continuous reach from river miles 131 to 137 would have less stable flow regimes than other channels in the middle Susitna River. Characteristic mainstem stage fluctuations may prove IJseful in subsequent -analyses,especially in the interpret,ation of WUA curves.For example,a steep and laterally compressed WUA curve could be explained by the relatively large response of mainstem stage to dis.charge at a mainstem reach. Table 13.Stage increase at selected cross sections in the Talkeetna-to-Devil Canyon segment of the Susitna River as mainstem discharge increases from 9700 to 23400 cfs. .... Cross Section No. 7 11 2~5 2~9 44 49 S4 ~f5 Source:R&M Consultants 1982 3.1.5 EVALUATION OF UPWELLING River IVlile 101.5 106.7 121.6 126.1 131.2 136.4 138.2 140.8 141.5 Stage Increase (Ft.) 1.9 2.6 2.2 2.0 3.5 3.3 2.8 2.7 2.4 Table 14 lists the specific areas that were determined to possess upwelling. Of 59 specific areas that had open leads in the March 1983 photography,40 57 58 - (68%)were observed to have chum salmon spawning activity during the 1984 habitat reconnaissance surveys.There was also a strong corre 1ati on between the presence of chum salmon spawners and those specific areas where upwelling was observed in the field but did not necessarily have open leads in the wi nter photography.Of these 85 sites,48 (56%)were observed to have chum """ salmon spawning activity. More "indicative of the importance of upwelling to spawning chum salmon is the percentage of specific areas where spawning activity was observed that also had upwelling.Of the 53 specific areas where spawning activity was observed, 48 (91%)were observed to have upwelling.ADF&G maps of chum salmon spawning areas were thus used to corroborate upwelling.A summary of fish observations appears in Appendix 5. Although field observations of upwelling are highly reliable,upwelling may have !~one unobserved in some areas due to specific conditions.For instance t turbid water conditions make it difficult to detect upwelling directly.Also, the absence of open 1eads in the wi nter ice cover does not ru 1e out the presence of upwelling.It is possible that the thermal quality of upwelling that occurs in relatively deep or swift and turbulent currents will become sufficiently diffused by mixing to preclude the formation of a thermal lead in the winter ice cover. The presence of upwelling is incorporated directly into the habitat transfor- mation categories defined in Table 3.Upwelling is thus included implicitly in the development of representative groups via the sequence of habitat transformation categories that occur at a specific area. ~, 59 ..... 3.2 HYDRAULIC COMPONENT Analysis of the hydraulic component of specific area habitats was focused on: 1)estimated or measured mean reach velocity during breached conditions, 2)substrate size,and 3)channel morphology.Of these three variables,mean reach velocity was the best and most direct index of channel hydraul ics for use in the characterization of habitat. 3.2.1 MEAN REACH VELOCITY The side channels of the middle Susitna River constitute a complex flow delivl~ry system with individual side channels beginning to flow at various mainstem discharges according to their breaching flows.A comparison of mean reach velocities between side channels for any given mainstem stage would yi e 1d a range of va 1ues dependi ng on whether the channels were nonbreached, barely breached,or flowing full.Mean reach velocity is thus a stage·-dependent variable whose use as a comparative index of side channel hydraulics is complicated by a dependence on breaching flow. Mean reach velocities were measured or estimated in this study at mainstem discharges ranging from approximately 8000 to 11000 cfs.In a few cases, estim.ates were made at 18000 cfs.Because of the relatively low flows that were coincident with the field trips,channels where velocities were measured for breached conditions had relatively low breaching flows.This reduced the need to consider the variability of breaching flows between channels in the interpretation of mean reach velocity data.Although it is possible to normalize mean reach velocity measurements at different side channels on the 60 - -- -- basis of breaching flow,it was not considered necessary in this study.Mean reach velocities are presented in Tables 17-26. The incomplete data set that was obtained due to consistent low flows during reconnaissance restricted the use of mean reach velocities for the comparative eva1ua,tion of hydraulics to specific areas with low breaching flows.Mean reach velocities were obtained during breached conditions for 63 of the 172 specific areas delineated in the middle Susitna River. The velocity data collected was also useful in describing the hydraulic characteri sti cs of each habi tat tralnsformati on category.The foll owing general1izations are provided for eaclh category to develop a qualitative appreciation of the trends depicted in Figure 10. Categclry a -Tri butary mouth habi tat.These habitats exi st as c1 ear water plumes at the confluence of tributaries to the middle Susitna River. Thi s category has not been di rectly addressed withi n the extrapol ati on methodology because of the compal"ative1y small amount of surface area associated with this habitat type. Category 1 -Upland slough and side slough habitats that do not transform ...,ithin the flow range of interest.These areas offer low velocities, frequently near-zero,with the greatest hydraulic disparity being depth. Categclry 2 -Side slough habitats that have transformed from side channel habitats and which possess winter upwelling.These areas are typified as Cl series of clearwater pools connected by short,shallow riffles.Riffle 61 velocities are frequently less than 1 fps and 0.5 feet or less in depth. Pool velocities are near zero and depths are generally less than 3 feet. Category 3 -Side slough habitats that have transformed from side channel habitats.These are distinguished from Category 2 areas only by the lack of an upwelling groundwater source~that persists throughout winter.The t~draulic characterization is the same as that of C~tegory 2. Category 4 -Side channel habitat that has transformed from mainstem habitat or has remained as side channel habitat at the evaluation flow.These clreas display greater hydraulic diversity than the previous categories . .-Velocities range from approximately 2-5 fps (10000 cfs mainstem)between specific areas.- Category 5 -Side channel habitat that has transformed from indistinct channels (Category 6).These arE~distinguished from Category 4 areas primarily by the presence of one Slravel bar bank which becomes inundated at high mainstem discharges t causing the channel to appear less visible (·indistinct)in the aerial photo9raphy.These channels typically have higher velocities,often greater than 5 fps (10000 cfs mainstem)t than Category 4 channel s. Category 6 -Indistinct areas that remain indistinct through the flow range of ;:nterest.This category includes those riverine areas termed shoals.By definition,they are shallow wa,ter areas,typically marginal to a mainstem channel.Depths are genE~rally under 4 feet and velocities are 62 reduced compared to mean mainstem velocities as a result of channel edge effects. Category 7 -Side slough habitats that have transformed from turbid indistinct channels and which possess winter upwelling.These areas are distin- guished from Category 2 areas primarily by their origin from indistinct rather than di sti nct channel s.The hydraul ic characterization is the same as that for Category 2. Category 8 -Side slough habitats that have transformed from turbid indistinct areas.These areas are di sti ngui shed from Category 3 areas primarily by -their origin from indistinct rather than distinct channels.The hydrau- lic characterization remains the Silme as that for Category 3. Category 9 -Specific areas that become dewatered.This is a terminal category that requires no hydraul ic characterization.These areas may -contain isolated pools that,by definition,have no habitat value. Category 10 -Mainstem habitats that do not transform within the flow range of interest.These channels are typically deeper and swifter than any other habitat category.Mean vel ociti es are frequently 5 fps (lOOOO cfs mainstem)or greater. 3.2.2 SUBSTRATE SIZE ..... In the evaluation of substrate size,dominant substrate codes were used (see Appendix 2).Frequently more than one code was selected because of the evenly 63 balanced mixture of fine and coarse substrate size classes present at many specific areas.Sands were distributed throughout the middle Susitna River segment and were considered to be less 'indicative of specific area hydraulics. For this reason,when more than one dominant substrate size code was selected, the coarser size class was uied as the index of channel hydraulics. 3.2.3 CHANNEL MORPHOLOGY..... ChannE~l morphology was the most indirect index of specific area hydraul ics used to characterize habitat.During the course of the habitat reconnaissance field work,considerable evidence of repetitive form was observed throughout the m"iddle Susitna River.Sometimes a distinct plan form was recognized from the air in transit to a specific area.Other times a distinctive riffle/pool -patte]!'n was recogni zed whil e on the !~round.Silllil ari t;es between spec;fi c 64 .... areas were recorded on the habitat inventory data form for consideration in the development of representative groups.Careful inspection of aerial phot09raphy also revealed similarities in plan form between individual side channE!ls. The m'iddle Susitna River has been divided into six discrete reaches by R&M Consull tants (1982)based on characterii sti c mai nstem channel patterns (Table 15).Dividing the mainstem in this manner provides the basis for evaluating long term trends in main channel morphology.More applicable to the study of juven'i1e chinook salmon habitat,which is concentrated in the peripheral areas of the river,is the identification of side channel complexes.Complexes are systerns of adjacent,often interconnected,side channels which convey mainstem water..Major side channel complexes of the middle Susitna River identified in this study are listed in Table 16 and are easily discernible in the aerial photo!~ra phy in Appendix 1. Although channels within a complex are sometimes hydraulically,hydro- 10gici:l.l1y,and morphologically similar since they are influenced by the same rna instem conditions,such as slope,stage response to di scharge,and sediment load,more than one habitat type is generally represented in a complex. Habitat type is thus sporadically represented in different side channel complexes throughout the middle Susitna River • A stcltistical approach was taken to study the similarities be-tween side channel areas in the middle Susitna River based on plan form.Through a cluster analysis of several side channel variables,including length,width, 1ength-to-width ratio,channel sinuosity,and the number of bends,six 65 Table 15.Definition of reaches within the Talkeetna-to-Devil Canyon segment of the Susitna River. -River Mile RM 149 to 144 RM 144 to 139 RM 139 to 129.5 RM 129.5 to 119 RM 119 to 104 RM 104 to 95 Average Slope 0.00195 0.00260 0.00210 0.00173 0.00153 0.00147 Description Single channel confined by valley walls.Frequent bedrock control points. Split channel confined by valley walls and terraces. Split channel confined occasionally by terraces and valley walls.Main channels~side channels,and sloughs occupy valley bottom. Split channel with occasional tendency to braid.Main channel frequently flows against west va 11 ey wa 11 . Subchannels and sloughs occupy east flood plain. Single channel frequently incised,and occasional islands.. Transition from split channel to braided~occasionally bounded by terraces.Braided through the confluence with Chulitna and Talkeetna Rivers. Source:R&M Consultants 1982. Table 16.Major side channel complexes of the Talkeetna-to-Devil Canyon segment of the Susitna River. RefE~rence Name Location (RM) Whiskers Creek 100-102 Bushrod Slough 117 -118 Oxbow II 119-120 Slough 88 121-123 Sku']l Creek 125-126 Fourth of July 131-132 Slough 21 141-142..... - 66 """ distinct cluster groupings were identified.The findings corroborated subjec- tive evaluations of morphologic s"inrilarities between side channels. A discriminant function multivariate analysis was performed using the six cluster groupings to determine the relative importance of variables in defining morphologic groups.The length-to-width ratio was the most important variable with channel width second,followed by channel length.A limitation of thE!multivariate analysis was that it could be appl ied only for distinct side channels where it was possible to evaluate each of the previously mentioned variables.This limited the analysis to 70 specific areas. Subjective evaluation of channel morphology was the primary criterion in the development of three representative groups (Tables 21,22,and 26). 3.3 STRUCTURAL COMPONENT 3.3.1 STRUCTURAL HABITAT INDICES The structural habitat index is used in the extrapolation methodology to adjust the amplitude of the habitat availability curve of a modeled specific area to more accurately represent an associated nonmodeled specific area within the same representative group.The importance of the index is as a species-specific,Susitna-specific,relative index to be applied within representative groups and not as an absolute index of structural habitat quality.It was not intended that the SHI be used as a comparative index of habitat qual ity between representative groups.The criteri a for devel opi ng the SHI for Representative Group I were slightly different than for the other 67 ------_._----,------ ""'" .... - .- representative groups.Structural habitat quality should not be <:onfused with overall habitat quality.Note that although a representative group may appear to offer higher quality habitat than another representative group by virtue of higher mean SHI values,when other (e.g.,hydraulic)criteria are considered this may not be true.Comparative statistical treatments of SHI values for representative groups are considered inappropriate and are not presented. The structural habitat index for each specific area appears in Tables 17-26 . In vi,ewing the range of SHI values within representative groups,two trends are alpparent:(1)many specific are!as have comparable SHI values;and (2)some specific areas are rated more than twice as valuable as others.The first trend can be expected and explained as resulting from the occurrence of similar river processes within each rl:!presentative group.The second trend emphasizes the vari abi 1i ty of structulf'a 1 habitat attributes that may occur within representative groups as accorded by local conditions.The range of SHI values in these areas is reasonable and reflects the importance of struc- tural cover to juvenile chinook habitat quality.In a previous study of instrE~am enhancement structures by Ward and Slaney (1979),the standing crop of steelhead parr and coho fingerlings increased threefold in a boulder- enhanced reach of stream over preplacement values. 3.4 DEVELOPMENT OF REPRESENTATIVE GROUPS Representative groups are composed of specific areas that are hydrologically, hydraulically,and morphologically similar.Variables that were used in the development of representative groups are:breachi ng flow,habitat trans- format;on category sequence,mean reach velocity,flow pattern,and channel 68 .... .... .... .... morphology.Field notes provided core groupings of specific areas that were observed to be similar.Field experience,.coupled with professional judge- ment,provided the balance of the matrix needed to discern representative groups. Although variables describing each of the components of aquatic habitat character were cons idered in the development of representative groups,fre- quently one or two components dominated the distinction of a group.The character of Representative Group I (Table 17),for example,is dominated by its rE!lative isolation from a mainstern water source (hydrologic component). This qroup includes upland sloughs and side sloughs with breaching flows greater than 35000 cfs.Principal water sources are groundwater and surface runoff,with several of these specif"ic areas receiving inflow from small tributaries.In the geomorphic regimE~of the middle Susitna River,these specific areas are remnant channels fo111owing events from ice processes and/or channel migration. The character of Representative Group II (Table 18)is dominated by relatively high breaching flows (20000 to 33000 cfs)and the presence of upwelling groundwater sources.These specifi c areas are commonly called side sloughs. Morphologically,these channels tend to be more sinuous than those of other representative groups.Geomorphica11y,several of these specific areas have succeeded from side channels since 1949 as their head berms have emerged relative to the mainstem (LaBelle et a1,.1985).Several others that were side sloughs in 1949 have emerged to become upland sloughs (Representative Group I) today. 69 !"'" - The ch,aracter of Representative Group III (Table 19)is dominated by breaching flows (8200 to 16000 cfs)intermediate to those of most side channels and side sloughs.Although the channel morphology is more characteristic of side channels than side sloughs,portions of these channels commonly contain clear groundwater from upwelling sources in their nonbreached phase.Transformation from side channel to side slough habitat is thus characteristic of this group as evidenced by the habitat transformatjion category sequence. The character of Representative Group IV (Table 20)is dominated by low breaching flows «5100 cfs)and mean reach velocities between 2 fps and 5 fps (10000 cfs mainstem).This group includes specific areas commonly called side channel s.The di sti nction between s'j de channel and mai nstem habitat is primarily one of size.Generally,side channels convey less than approxi- mately 10%of the total flow in the river.In addition,side channels tend to have lower flow velocities and less coarse bed material than mainstem channels on thE!average. The character of Representative Group V (Table 21)is dominated by channel morphology.This group includes shoatl areas,many of which transform to slough habitats as mainstem discharge decreases.Shoal areas are described as shallow water areas bordering deeper mainstem channels.Velocities in these areas are generally less than mean mainstem velocity and flow characteristics can be described as riffle or run.Shoals frequently form as a point bar on the inside bend of a meander,as an alternate bar,or at the downstream end of an island where the ~ainstem has aggraded. 70 The character of Representative Group VI (Table 22)is dominated by channel morphology.This group includes overflow channels that parallel the adjacent mainstem,usually separated by a sparsely vegetated gravel bar.These po speci fi c areas mayor may not possess eln upwell i ng groundwater source.It is likely that many of these channels have formed as a result of ice jams rout"ing mainstem water around the primary flow corridor. The character of Representative Group VII (Table 23)is dominated by a charac- teristic riffle/pool sequence.ThesE~specific areas would otherwise be included in Representative Group IV or Group III except for a characteristic large backwater that forms near the channel mouth and a riffle upstream of it. Mean Y'each velocities are between 2.0 fiPs and 4.0 fps (10000 cfs mainstem). .- The character of Representative Group VIII (Table 24)is dominated by a tendency of these channels to dewater at relatively high mainstem flows. DewatE!ring frequently occurs soon after the channel becomes nonbreached and is reflected by a 9 in the habitat transformation category sequence.Channels in thi s 9rouP are frequently oriented wi tlh a 30+ang1 e to the rna i nstem fl owl-j ne at their heads and contain finer substrate than IllOSt groups.Large sand deposlits are common in the channels of this group • Representative Group IX (Table 25)consists of mainstem habitats.The charac- ter of this group is dominated by 10\~,breaching flows «5100 cfs)and mean reach velocities frequently greater than 5 fps.These specific areas generally convey more than approximate"ly 10%of the total di scharge and have coarSE~r bed material on the average compared to other groups.Geomorphically, 71 these specific areas are currently the primary flow conveying channels in the ~middle Susitna River. The character of Representati ve Group X (Table 26)is domi nated by channel morphology and local hydrology.This gl"OUp includes large mainstem shoals and mainstem margin areas that had open leads in the March 1983 aerial photo- r-graphy.Mainstem shoals are large e;<panses of shallow water adjoining a primary mainstem channel and they typically occur on the inside of a bend,as an alternate bar,or at the downstream side of an island as the result of aggradation in the mainstem.This groUip is distinguished from Representative Group V primarily by size and typically coarser bed material.This group also :-includes mainstem margin areas that \lfere suspected of having an upwelling groundwater source as evidenced by open (possibly thermal)leads in the aerial photography.Other than the possible presence of upwelling,nothing remark- able distinguishes these specific areas from other mainstem channel margins in the middle Susitna River. Al though of 1ess importance in the developrnent of representative groups, dominant substrate size codes and channel length-to-width ratios were included in Tables 17-26 where data was availalble.These were included to aid the readelr'in gaining an appreciation of the habitat characteristics of the various specific areas. -- 72 Table 17.Representative Group I --Description:Habitat character is domimited by high breaching flow.This group includes all upland sloughs and Slough 11 (RM 135.6R).Specific area hydraulics are characteri zed by pool ed cl ear water with vel ocit;es frequently near-zero and depths greater than 1 ft.Pooled areas are commonly connected by short riffles where velocities are less than 1 fps and depths are less than 0.5 ft. Habitat Meatn 1 Channel, Breaching Transformation Reach Dominant Length-Struct'ural Specific Flow Category Veloc:i ty Substrate to-Width Ha'bitat Area (cfs)Sequence (fps)Code Ratio IndeX:Model -102.2L >35000 1 0+1 0.83 105.2R >35000 1 LO 1 0.69 107.6L >35000 1 0+2 0.44 RJHAB 108.3L >35000 1 LO 1 0.70 112.5L >35000 1 0 1 0.68 RJHAB 119.4L >35000 1-9 0 1 0.45 120.0R >35000 1 0+1 0.50 121.9R >35000 1 <LO 9 0.72 123.1R >35000 1 ()+1 0.45 123.3R >35000 1 0 2 0.67 127.2M >35000 1 ()+2 0.58 129.4R >35000 1 0+1 0.44 133.9L >35000 1 <0,.5 9 0.67 134.0L >35000 1 0+1 0.89 135.5R >35000 9 0+1 0.32 135.6R >35000 1 ()+6 0.54' 136.9R >35000 1 ()+2 0.69 139.0L >35000 1 0 2 0.45 139.9R >35000 1 0+1 0.74 ""'" I Mean reach velocities for nonbreached conditions RJHAB :::tlDF&G Habitat Model ---=Data Not Available """ .... 73 Table 18.Representative Group II Description:Habitat character is dominated by relatively high breaching flows and the pres€,nce of upwelling groundwater sources that persist throughout winter.This group inc:ludes the specific areas that are commonly called sloughs.These specific areas typically have relatively large channel length-to-width ratios. F""Habitat Mecin Channel Breaching Transformation Reiich Dominant Length-Structural Specific Flow Category Veloc:i ty Substrate to-Width Habitat Area (cfs)Sequence (fps)Code Ratio Index Model 100.6R 33000 1 9 0.60 101.4L 22000 2 10 38.4 0.54 RJHAB 101.8L 22000 2 10 77 .8 0.65 113.1R 26000 1 6 0.31 113.7R 24000 1 6 100.0 0.51 RJHAB 115.6R 23000 4-2 9 21.2 0.54 117.9L 22000 2 9 29.3 0.62 -- ~118.0L 22000 3 9 12.8 0.39 ' 121.8R 22000 3 2 20.9 0.27 ___ 122.4.R 26000 1 1 23.1 0.29 122.5R 20000 2 8 104.5 0.51 123.6R 25500 1 2 0.43 125.1R 20000 2 3 25.5 0.48 125.9R 26000 1 12 74.7 0.56 126.0R 33000 1 9 71.8 0.51 IFG 126.3R 27000 4-2 9 39.6 0.59 131.8L 26900 1 ..-8 0.45 I"""133.9R 30000 1 7 0.50 135.3L 23000 3 12 19.1 0.30 137.5R 22000 2 12 0.44 DIHAB 137.5L 29000 1 1 0.61 137.8L 20000 2 11 15.0 0.54 137.9L 21000 2 11 76.0 0.50 140.2R 26500 1 ..-11 73.3 0.50 142.1R 23000 1 11 0.60 142.2R 26000 1 9 0.52 143.4L 23000 1 13 60.0 0.55-,144.4L 21000 2 13 91.5 0.60 RJHAB .... IFG =Instream Flow Group Habitat Model DIHAB =Direct Input Habitat Model developed by EWT&A RJHAB =ADF&G Habitat Model --=Data Not Available 74 - ..... - Table 19.Representative Group III Description:Habitat character is dominated by intermediate breaching flows and relatively broad channel sections.This group includes side channels which become nonbreached at intermediate mainstem discharge levels and transform into slough habitat at lower discharges.Breaching flows are typically lower than for Group II, upwellingl is present,and the length-to-~~idth ratios of the channels are generally 1ess than rati os for Group I I. IFG =Instream Flow Group Habitat Model DIHAB =Direct Input Habitat Model developed by EWT&A RJHAB =ADF&G Habitat Model --=No Data Available 75 Table 20.Representative Group IV Description:Habitat character is dominated by low breaching flows and intermediate mean reach velocities.This group includes the specific areas that are commonly called side channels.These specific areas possess mean reach velocities ranging from 2-5 fps at a mainstem discharge of approximately 10000 cfs. -Habitat MecLn Channel Breaching Transformation Reach Dominant Length-Structural Specific Flow Category Vel oei ty Substrate to-Width Habitat Area (cfs)Sequence (fps)Code Ratio Index ~Iode 1 100.7R <5100 10-4 3 ..8 8 14.5 0.49 108.7L <5100 10-4 3 ..0 11 6.9 0.53 110.8M <5100 4 3 ..5 6 5.9 0.48 111.5R 5100 10-4 2 ..5 9 13.8 0.48 r-112.6L <5100 4 3 ..0 10 10.0 0.60 IFG 114.0R <5100 4 3.0 9 0.43 116.8R <5100 10-4 4.5 9 10.6 0.48 .....119.5L 5000 4 2.5 8 20.9 0.54 119.6L <5100 4 3.0 10 54.6 0.53 121.7R <5100 10-4 4.0 8 24.7 0.48 124.1L <5100 10-4 3.5 11 17.0 0.46 125.2R <5100 4 4.5 10 .37.8 0.56 DIHAB 127.0M <5100 4 2.5 7 10.1 0.65 127.4L <5100 10-4 4.0 9 36.4 0.46-129.5R <5100 6-5 3.0 8 13.5 0.56 131.7L 5000 4 2.6 10 48.6 0.47 IFG 134.9R <5100 4 4.0 8 22.3 0.56 IFG 136.0L <5100 4 2.0 5 24.0 0.55 IFG 139.4L <5100 4 2.0 8 3.6 0.61 139.6L <5100 10-4 3.2 13 14.9 0.51 140.4R <5100 6 3.0 10 7.7 0.48 145.3R <5100 10-4 4.5 12 11.8 0.5-3 IFG =Instream Flow Group Habitat Model DIHAB =Direct Input Habitat Model developed by EWT&A --=No Data Available - 76 .... MSS =Mainstem Shoal IFG =Instream Flow Group Habitat Model DIHAB =Direct Input Habitat Model developed by EWT&A --=No Data Available 77 Table 22.Representative Group VI ~Description:Habitat character is dominated by channel morphology.This group includes overflow channels that parallel the adjacent mainstem,usually separated by a sparsely vegetated gravel bar.These specific areas mayor may not possess an upwelling groundwater source. -Habitat Mean Channel Breaching Transformation Reilch Dominant Length-Structural Specific Flow Category Velocity Substrate to-Width Habitat..,.,Area (cfs)Sequence (fps)Code Ratio Index Model -102.6L 6500 4-3 2 ..0 12 14.2 0.69 106.3R 4800 4 2 ..5 11 17.4 0.53 107.1L 9600 4-3-9 12 0.69 117.9R 7300 4-3 2,,0 12 24.7 0.49 119.7L 23000 2 9 0.51 133.8L 17500 4-2 9 24.0 0.49 IFG 135.7R 27500 1 3 26.0 0.32 ~136.3R 13000 4-2 11 14.4 0.54 IFG 138.0L 8000 4-2 11 0.53 138.8R 6000 6-5-9 3.0 9 15.0 0.31 r--139.5R 8900 6-5-7 2.5 12 0.31 140.6R 12000 6-5-8-9 10 0.61 142.0R 10500 5-8 12 0.53 .... "...IFG =Instream Flow Group Habitat Model--=No Data Available - 78 ..... - - - Table 23.Representative Group VII Description:Habitat character is dominated by a characteristic riffle/pool sequence. The Little Rock IFG modeling site (RM 119.2R)is typical)with a riffle just downstream of the side channel head that flows into a large backwater pool near the mouth • Habitat Mean Channel Breaching Transformation Reclch Dominant Length-Structural Specific Flow Category Velocity Substrate to-Width Habitat Area (cfs)Sequence (fps)Code Ratio Index Model 114.1R <5100 5 2,,5 8 22.8 0.31 DIHAB 119.2R 10000 4-3 3,,6 10 15.1 0.41 IFG 121.1L 7400 4-3 3,,0 6 41.2 0.43 123.0L <5100 4 2,,0 7 17.4 0.39 125.6L <5100 6-5 3,,5 12 9.5 0.52 127.5M <5100 6-5 3,,5 6 24.2 0.31 131.3L 9000 4-2 4,,0 7 18.2 0.31 DIHAB IFG =Instream Flow Group Habitat Model DIHAB =Direct Input Habitat Model developE~d by EWT&A --=No Data Available 79 Table 24.Representative Group VIII Description:Habitat character is dominclted by the tendency of these channels to dewater at a relatively high mainstem discharge.Channels in this group are frequently oriented with a 30°+angle to the mainstem flowline at their heads. Habitat Melan Channel Breaching Transformation Reach Dominant Length-Structural Specific Flow Category Velodty Substrate to-Width Habitat Area (cfs)Sequence .(tIPs)Code Ratio Index Model .-. 101.3M 9200 4-9 11 9.3 0.57 102.0L 10000 4-9 5 2.4 0.43 104.3M 21000 4-3-9 9 4.3 0.48 109.5M 16000 4-9 9 8.7 0.49 112.4L 22000 9 11 18.4 0.27 117.1M 15500 4-3 3 16.0 0.32 117.2M 20000 3-9 3 9.8 0.32 118.6M 14000 5-8 3 0.36....119.8L 15500 4-9 9 7.8 0.51 120.0L 12500 4-3-9 10 20.3 0.32 121.5R 19500 3-9 6 0.32 121.6R 15500 4-3-9 9 0.60 123.2R 23000 8-9 3 0.2f 124.8R 19500 8-9 2 3.9 0.46 125.6R 26000 9 8 12.7 0.44 128.4R ·9000 6-5-9 8 0.56 132.5L 14500 4-9 11 10.0 0.57 135.0R 21500 9 6 11.2 0.44 135.1R 20000 3 6 18.9 0.44 144.0M 22000 9 12 9.0 0.31 145.6R 22000 9 8 56.3 0.6e 146.6L 26500 1-9 12 0~48 No Data Available ,.... 80 Table 25.Representative Group IX Description:Habitat character is dominated by low breaching flows and relatively swift velocities.This group includes specific areas that were categorized as mainstem at 5100 cfs,as well as side channels (Category 5)and indistinct side channels (Category 6)with mean reach vE~locities greater than 5 fps at 10000 cfs mainstem. Habitat Mean Channel Breaching Transformation Reach Dominant Length-Structural Specific Flow Category Velocity Substrate to-Width Habi tat Area (cfs)Sequence (fps)Code Ratio Index Model r-101.5L <5100 10 3 ..0 12 12.7 0.45 IFGi 104.0R <5100 6 5..5 8 9.4 0.48 105.7R <5100 10 3,.0 11 8.6 0.53 108.9L <5100 10 5,,0 11 9.0 0.58 109.4R <5100 10 >4.0 12 18.2 0.45 111.OR <5100 10 3.5 6 12.3 0.35-113.8R <5100 6 6.0 12 7.2 0.53 117.7L <5100 6-5 5.5 8 8.5 0.41 127.1M <5100 6-5 5.0 10 13.9 0.53 128.3R <5100 6 >5.0 12 0.63 129.3L <5100 10-5 >6.0-12 12.2 0.62 129.8R <5100 10 >4.0 12 9.7 0.5E) 131.2R <5100 5 >5.0 8 13.6 0.48 135.0l <5100 10 4.5 12 6.1 0.48 139.2R <5100 6 >5.0 10 10.7 0.61 141.2R <5100 6-5 >5.0 13 0.69 F'141.3R <5100 5 >5.0 12 0.69 142.8R <5100 6 >5.0 12 0.56 144.0R <5100 10 >5.0 11 15.1 0.5"3 144.2L <5100 10 3.5 12 21.0 0.53 147.1L <5100 10 5.0 12 10.8 0.57 IFG - i IFG =Instream Flow Group Habitat Model --=No Data Available 81 Table 26.Representative Group X Description:Habitat character is dominated by channel morphology.This group includes large mainstem shoals and mainstl:m margin areas that had open leads in the March 1983 photography. Habitat Mean Channel Breaching Transformation Reach Dominant length-Structural Specific Flow Category Velocity Substrate to-Width Habi tat Area (cfs)Sequence (fps)Code Ratio Index Model 105.8ll MSS 6 12 0.5]DIHAB 109.3M MSS 6-9 8 0.48 111.6R 11500 6-8-9 10 0.49 113.6R 10500 6-8 8 0.55 113.9R 7000 6 8 0.48 F"'119.11L MSS 6 2 ..0 8 0.41 DIHABI121.1R MSS 6-5 3..5 10 0.47!133.81R MSS 6 2 ..0 12 0.48 DIHAB 138.71L MSS 6 3,,0 12 0.5-7 DIHAB 139.3L MSS 6 10 0.56 139.41l MSS 6 3,,5 11 0.41 DIHAB 142.8L MSS 6 1..5 9 0.36 148.2R MSS 6-9 12 0.48 i" MSS =Mainstem Shoal DIHAB =Direct Input Habitat Model developed by EWT&A --=No Data Ava i1 clb 1e 82 4.FUNCTION OF RESULTS IN EXTRAPOLATION This section introduces the methodology used to extrapolate results from modeled sites to nonmodeled areas of the middle Susitna River.As stated in the introduction,this methodology consists of three parallel pathways of analysis:1)quantification,2)stratification,and 3)simulation.The -function of each of these pathways is dl~scribed below. The quantification pathway,used to develop relationships between wetted surface area (WSA)and discharge for each specific area,provides the basis for detennining habitat quantities.The response to discharge relationships F'are developed by digitizing areas delineated on aerial photo reproductions at several mainstern flows.For a detailed discussion of the relationships of the response of wetted surface area to discharge in the middle Susitna River see Klinger~Kingsley (1985). The stratification pathway,used to group individual channels based on common characteri sti cs,assesses the representati veness of mode led sites to non- modeled areas of the river and provides an index of site-specific structural habitat qual ity for use in the derivation of habitat response to mainstem ..,"..q;:.,~ discharge relationships at nonmod~ed areas.Representativeness between r"'"modeled and nonmodeled specific areas is ~valuated using hydrologic,hydrau- lic,and morphologic indices derived from aerial photo and habitat inventory-data bases.Structural habitat indices are developed using habitat inventory data and ADF&G suitability criteria for'juvenile chinook salmon. ,ct'';:~ ..... 83 ..... The simul ati on pathway,usi ng habitat model s to develop rel ati onshi ps between habitat availability and discharge at a spectrum of habitat types,identifies the characteristic habitat response for a given type of habitat.The modeling techniques used in this study are:1)the lnstream Flow Group1 (lFG)habitat model (Milhous et ale 1984);2)a hablitat model (RJHAB)developed by ADF&G (Schmidt et ale 1984);and 3)a direct input variation of the IFG habitat .....model (DIHAB)developed by EWT&A (Hilliard et ale 1985).Tributary habitats were not evaluated because they would not be affected by an altered mainstem flow regime.Nleither were tributary mouth habitats evaluated,because they constitute a small portion of the middlle Susitna River habitat and would not be affected significantly. ~' - ..... The basic,unit generated by the habitat models is weighted usable area (WUA). Weighted usable area is a quantitative index of juvenile chinook salmon habitat availability at a given streamf"llow.It is a product of wetted surface area (WSA)and suitabil ity factors for perti nent habitat variables (i.e.,flow velocity,depth,and cover)(Suchanek et ale 1984).Pertinent to extrapo- lation in the simulation analysis is the concept of the habitat availability index (HAI).Dl~fined as WUA/WSA,the HAl provides a unitless measure of the overall habitat suitability of a study site at a given streamflow.When the HAl versus discharge is plotted,the resulting curve represents a characteris- tic habitat response for a given type of habitat.This relationship is used to derive habitat response to discharge relationships at nonmodeled areas. 1 Now known as the lnstream Flow and Aquatic Systems Group. 84 To derive HAl versus discharge relationships for nonmodeled areas,products from the stratification and simulation pathways of analysis must be inte- grated.These products are:(1)HAl versus discharge curves for each modeled specific area;(2)representative groups;(3)breaching flows for modeled and nonmodeled specific areas;and (4)structural habitat indices (SHI)for modeled and nonmodeled specific areas.Three assumptions for these relation- F""ships are also required:(1)the HAl versus discharge curve of modeled specific areas is characteristic of nonmodeled specific areas within the same representative fjroup;(2)breaching flows for modeled andnonmodeled specific areas occur at the same relative position in the respective HAl versus dis- charge curves;and (3)the amplitude of HAl versus discharge curves derived for nonmodeled specific areas can be adjusted linearly using the ratio of SHI's for nonmodeled and modeled specific areas.The procedures to derive HAl versus discharge curves for nonmodele~d specific areas are illustrated in Figure 12 and described as follows:(1)the characteristic curve of the representative modeled specific area (MS)is assumed and shifted along the ,.....X-axis to correspond with the breachin~~flow of the nonmodeled specific area (SA);and (2)the amplitude of the curve is adjusted using the formula HAI(SA)=HAI(MS)X (SHI(SA)/SHI(MS)).This procedure is repeated for each nonmodeled specific area in the middle Susitna River. To calculate WLJA at nonmodeled specific areas,HAl versus discharge curves from the foregoing analysis are combined with results from the quantification pathway.As defined earlier,HAIls are unitless suitability factors calcu- lated as WUA/WSA.From this definition it follows that WUA can be calculated as HAl times WSA.By combining WSA rellationships developed for each specific area via the quantification pathway with HAl versus discharge relationships, 85 BREACHING FLOW ADJUSTMENT ... , SA", Qs,o. - MAINSTEM DISCHARGE MS (a) - STRUCTURAL HABlT~T QUALITY ADJUSTMENT - HAl =HAl .SHISA SA MS.SHIMsv--.------....... '-SA '-/ ...... MS (b) MAINSTEM DISCHARGE .- (c) MODELED SPECIFIC AREA (MS)CURVE \DERIVED NON MODELED /SPECIFIC AREA (SA)CURVE MAINSTEM DISCHARGE Figure.12.Derivation of specific area specifi c area (b)structural curve. a HAl versus discharge curve for a nonmodeled (SA)from the representative curve of a modeled (MS)showing:(a)breaching flow adjustment; habitat quality adjustment;and (c)the derived 86 ."~ .--........------------f"""""""'....-,...--------------- - ..... WUA versus discharge curves are derived for each specific area.By summing the WUA versus discharge curves for each specific area within a representative group,habitat response to discharge relationships are developed at the habitat type level.Systemwide habita,t response to discharge relationships can be developed subsequently by summinq the relationships determined for each representative group.For a detailed discussion of the development and presentation of habitat response relationships at middle Susitna River study sites see Stew,ard et al.(l985).F'igure 13 shows a flow chart for the stratification Clnd integration pathways of the extrapolation methodology • 87 r ..... Stratification Palthway of 'the Extrapolation Methodology Stratification Pathway •Delineate specific areas of homogeneous aquatic habitat type on aerial photo plates. •Conduct reconnaissance-level survey ()f aquatic habitat at each specific area. •Analyze aerial photography and habitat reconnaissance data base to describe hydrologic,hydraulic,and structural components of each specific area. •Stratify -specific~Heas into Representaltive Groups using available hydro- logic and hydraulic information. •Develop Structural Habitat Indices for each specific area including modeled sites using the habitat reconnaissance data base. Quantification t Simulation pathWay",Integra1l1on /pathway The following steps are completed for each evaluation speciesllife stage. •Use the habitat availability index (HAl)versus discharge curve of a modeled specific iarea to synthesize the HAl versus discharge curve for a non- modeled specific area within the same Representative Group.Shift the curve laterally to compensate for differences in breaching flow between a modeled and nonmodeled specific an~a.Adjust the HAl curve vertically using the ratio of structural habitat indices to account for differences in structural habitat quality between modeled and non modeled specific areas. •Calculate the weighted usable area (WUA)present within each specific area using surface area and habitat availability indices for each mainstem evaluation flow. •Sum the WUA calculated for all specific areas within each Representative Group fOIr each mainstem evaluation flow. •Sum theWUA calculated.for all Representative Groups for each mainstem evaluation flow to forecast Middle Sus/tna River habitat response to flow variations. Figure 13.Flow chart for the stratification and pathway of the extrapolation methodology. 88 - LITERATURE CITED ..... lITERATURE CITED Binns,N.A.and F.M.Eiserman.1979.Quantification of fluvial trout habitat in Wyoming"Trans.American Fisheries Society 108:215-228. Bovee,K.D.1982. A guide to stream habitat analysis using the instream flow incrementa"1 methodology.U.S.Fish and Wildlife Service.Instream Flow Information Paper 12.1 vol. Chamberlin,T.W.1981.Systematic aquatic biophysical inventory in British Columbia,Canada in Acquisition and utilization of aquatic habitat inventory 'information.Armantrout,N.B.ed.,Proceedings of a symposium held 28-30 October,1981 Hilton Hotel,Portland,Oregon. Chow,V.T.1959.Open-channel hydraulics.McGraw-Hill.680 pp. deleeuw,A.D.1981. A British Columbia stream habitat and fish population inventory system in Acquisition and utilization of aquatic habitat inventory 'information.Armantrout,N.B.ed.,Proceedings of a symposium held 28-30 October,1981 Hilton Hotel,Portland,Oregon. E.Woody Trihey and Associates and Woodward-Clyde Consultants.1985. --Instream flow relationships report.Volume No.1.Draft report for Alaska POWE~r Authority,Susitna Hydroelectric Project,Anchorage,AK. - - .... Estes,C.C.,and D.S.Vincent-lang,eds.1984.Report No.3.Aquatic habitat and instream flow investigations (May-October 1983).Chapter 7: An evaluat"ion of chum and sockeye salmon spawning habitat in sloughs and side channels of the middle Susitna River.Susitna Hydro'Aquatic Studies,Alaska Dept.of Fish and Game.Report for Alaska Power Authority,Anchorage,AK.Document 1936.1 vol. Glova,G.J.and M.J.Duncan.1985.Potential effects of reduced flows on fish habitats in a large braided r'iver,New Zealand.Transactions of the Ameri can Fli sheri es Soci ety 114:165·-181. Gorman,O.T.and J.R.Karr.1978.Habitat structure and stream fish commu- nities.Ecology,59(3):507-515. Hilliard,N.D.,et al.1985.Hydraul'ic relationships and model calibration procedures at 1984 study sites in the Talkeetna-to-Devil Canyon segment of the Susitna River,Alaska.E.Woody Trihey and Associates.Report for Alaska Power Authority,Anchoriige,AK.1 vol. Hynes,H.B.N.1970.The ecology of running waters.University of Toronto Press.55~j pp. Klecka,W.R.1975.Discriminant analysis.Pp.434-467 in Nie,N.H.et al. S.P.S.S.:statistical package for the social sciences.McGraw-Hill . 89 .- Klinger,S.and E.W.Trihey.1984.Response of aquatic habitat surface areas to mainstem discharge in the Ta'lkeetna-to-Devil Canyon reach of the ~Susitna River,Alaska.E.Woody Trihey and Associates.Report for Alaska Power Authority,Susitna Hydroelectric Project,Anchorage,AK. Document 1693.1 vol. Kl i nger-Ki ngs 1ey,S.1985 .. mainstem discharge in Susitna River,Alaska. Alaska POWE!r Authori ty. Response of aquatic habitat surface areas to the Talkeetna-to-Devil Canyon segment of the Draft report.E.Woody Trihey and Associates. Susitna Hydroelectric Project.1 vol. Labelle,J.C.,M.S.Arend,L.D.Leslie,W.J.Wilson.1985.Geomorphic change in the middle Susitna River since 1949.University of Alaska,Fairbanks, Arctic Environmental Information and Data Center.Report for Alaska Power Authority.Susitna Hydroelectric Project.1 Vol. Lane,E.W.1985.The importance of fluvial morphology in hydraulic engineer- ing.Amer'ican Society of Civil Engineers,vol.81,Paper No.745. Hydraulics Division. Water-resources engineering.1979.Linsley,R.K.,and J.B.Franzini. McGraw-Hill.716 pp. Milhous,R.T.,D.L.Wegner,and T.Waddle.1984.Users guide to the Physical Habitat Simulation System (PHABSIM).U.S.Fish and Wildlife Service. Instream Flow Information Paper 11.1 vol. Mosley,M.P.1982.Analysis of the effect of changing discharge on channel morphology and instream uses in a braided river,Ohau River,New Zealand. Water Resources Research,Vol.18,No.4,pp.800-812. R&M Consultants,Inc.1982.Sus itna Hydroel ectri c Project Morphology"Prepared for Alaska Power Authority,Anchorage,AK. River 105 pp. Reiser,D.W.,.and I.C.Bjornn.1979.Influence of forest and rangeland management on anadromous fi sh habi tat in Western North Ameri ca -l. Habitat requirements of anadromolls salmonids.Gen.Tech.Rep.PNW-96 Pacifi c Northwest Forest and Range Experiment Stati on,Forest Servi ce, U.S.D.A.Portland,Oregon. Schmidt,D.C.et al.1984.Report No.2.Resident and juvenile anadromous fish investigations (May -October 1983).Susitna Hydro Aquatic Studies, Alaska Dept.of Fish and Game.Report for Alaska Power Authority, Anchorage,AK.Document 1784.1 vol. Shera,W.P.,and E.A.Harding.1981.Cost-efficient biophysical stream surveys:a proven approach 1i!.Acqui siti on and util izati on of aquati c habitat inventory information.Armantrout,N.B.ed.,Proceedings of a symposium held 28-30 October,1981 Hilton Hotel,Portland,Oregon. Shields,A.1936.ItAnwendung der Aehnlichkeitsmechanik und der Turbulenz- forschung auf die Geschiebebewegung ll (Application of Similarity Princi- pl es and Turbul ence Research to Bed-Load Movement),lV1itteil ungen der Preuss.Versuchsanst fur Wasserbau und Schiffbau,Berlin,No.26. 90 -- Steward,III,C.R.1985.Suitability criteria recommended for use in IFR habitat modeling studies of thl~middle Susitna River.Technical memorandum.E.Woody Tri hey and Associates,Anchorage,AK.11 pp. Steward,III,C.R.,R.C.Wilkinson,and A.Milner.1985.Response of juve- nile chinook habitat to mainstem discharge in the Talkeetna-to-Devil Canyon segment of the Susitna River,Alaska.E.Woody Trihey and Associ- ates.Draft report for Alaska Powe~r Authority,Anchorage,AK.1 vol. Suchanek,P.M.,R.P.Marshall,S.S.Hale and D.C.Schmidt.1984.Juveni1e salmon rear'ing suitability criteri,a.49 pp.Part 3 in D.C.Schmidt et al.,eds.Report No.2.Resident and juvenile anadromous fish inves- tigations (May -October 1983).Susitna Hydro Aquatic Studies,Alaska Dept.of Fish and Game.Report for Alaska Power Authority,Anchorage, AK.Document 1784.1 vol. Vining,L.J.,J ..S.Blakely,and G.M.F'reeman.1985.Report No.5.Winter Aquatic Investigations (September 1983-May 1984).Vol.1:An .evaluation of the incubation life-phase of chum salmon in the middle Susitna River, Alaska.SLlsitna Hydro Aquatic Studies,Alaska Dept.of Fish and Game. Report for Alaska Power Authority,Anchorage,AK.Document 2658.1 vol. Ward,B.R.and P.A.Slaney.1979.Evaluation of instream enhancement struc- tures for the production of juvenile steel head trout and coho sa lmoni n the Keogh River:progress 1977 and 1978.B.C.Ministry of Environment, Fisheries Technical Circular No.45.47 pp. Wishart,D.19~78.Clustan User Manua'J 3rd Edition.Program Library Unit, Edinburgh University. 91 APPENDIX 1 SPECIFIC AREAS DELINEATED ON THE 23000 CFS AERIAL PHOTOGRAPHY 1 )I 1 'I .~1 I 1 1 ) '0 W ~~~2;OL_ :.........'... ~.....~./~.:.;.::~~~";::..:.:~~:/~:,,-~~:.~:~:.:.~!'~.j-~.~~~::~,~'~;iJt~¥~~f.~~i;~.tt~l#'~'-,;--,'~~.!\.}.u".~.·'\~.~r·.~(.'t--·:·~"ti<f!:!.S..•~;;'~~.Vk!~··~Il'"w.""-1..~.$.tt.if;iJt.:;:5.}:~;~~ Specific areas from river mile 100 to 104 at a LEGEND: L :::Left R :=Right H :::Middle RNR LNR 111S Right Not Reconned :::Left Not Reconned Left Mainstem Spawning reMS =Right Mainstem Spawning NNS :::~1iddle Hainstem Spawning T ::: + ~::: Tributary River Mile Flow Direction J J I 1 1 1 1 J I \.D..,. Specific areas from river mile 104 to 110 at a mainstem discharge of 23000 cfs. LEGEND: L =Left R =-Right H =~1iddle RNR LNR LMS Right Not Reconned Left Not Reconned =Left Hainstem Spawning RMS t1MS Right Mainstem Spawning Middle Hainstem Spawning T = += .-L.= Tributary River Bile Flow Direction 1 1 i ]J J -1 J ~en Specific areas from river mile 110 to 115 at a mainstem discharge of 23000 cfs. LEGEND: L =Left R ""Right M =Middle RNR ;: LNR LMS Right Not Reconned Left Not Reconned Left Mainstem Spawning R}IS MMS I • Right Mainstem Spawning ""Middle Mainstem Spawning T ""Tributary +=·River Mile -...=Flow Direction )-1 I I 1 I 1 J I I 1 1 i 1 1 I 1.0 O'l Specific areas from river mile 115 to 121 at a mainstem discharge of 23000 cfs. LEGEND: L =Left RNR =Right Not Reconned RMS =Right Hainstem Spawning T =Tributary R =Right LNR =Left Not Reconned MMS =Middle Mainstem Spawning +=River Mile M =Middle LMS =Left Mainstem Spawning --=Flow Direction -)1 1 1 ]1 i 1 ]J I l.O.......'>~1i:~<~1~;~~ ..."!..,:....::"""N~1~~f;~&1 '" Specific areas from river mile 121 to 126 at a mainstem discharge of 23000 cfs. LEGEND: L =:Left RNR =:Right Not Reconned RMS =:Right Mainstem Spawning T =:Tributary R =Right LNR =:Left Not Reconned MMS =Middle Mainstem Spawning +=River Mile M =:Middle LMS =Left Mainstem Spawning -'=:Flow Direction 1 I J J 1 1 I lD 0::> ;m:''''~':M'lI''"!::lf~'ml"l"'~,III<"t;~''I'.',,,,,:'Jtl<;~;.i!.'l"]l;:~,E .J .,;~'f.:\~.:;'''\!l{~,.~::..,..",,~!.,~~.::.J>.:(;>,~~j~~~;!'b~~~Z~~f~.·,~,,;~~~~.;~4,"'::;'\:::;I;~t':-~.~~~.:.~~~~~~.:.'~~~~':r~~~t4':t111:.~'~~i~~!~~"r~{·:~~)~~:,·,:;'-:'~"~'<;:~'''~,(''''';!'i~,•.,...~.,.;~••.~.,~~'If:\'.,..•.••'f'<,;-1 1:•.."•...~"'".-f:i",..~4;(_...... '.......r;t1 ••.f.:.""~~.j'"'\'...,,;--'\l'l···"':i;.,..';l'"~..~i~~;~~~ Specific areas from river mile 126 to 132 at a mainstem discharge of 23000 cfs. LEGEND: L =Left RNR =Right Not Reconned RMS ==Right Mainstem Spawning T ==Tributary R ==Right LNR ==Left Not Reconned MMS =Middle Hainstem Spawning +=River Mile M =Middle LMS =Left Mainstem Spawning -'==Flow Direction J 1 1 l 1 i J I 1 1 1 1 f)~.~,-:~.:./.f!~: .;.....:~135 1A~~"~:'".~~~,:.:;~ ,I -,.~t''''.•. Specific areas from river mile 132 to 138 at a mainstem discharge of 23000 cfs. + .-r- LEGEND: L =Left R ::Right H =Middle RNR =Right Not Reconned LNR ::Left Not Reconned LMS=Left Mainstem Spawning RMS MMS =Right Mainstem Spawning Middle Mainstem Spawning T ::Tributary ==River Mile Flow Direction I I 1 -1 -,i 1 1 1 J 1 I 1 j ~ D D Specific areas from river mile 138 to 144 at a mainstem discharge of 23000 cfs. LEGEND: L =Left R =Right M =Middle RNR LNR LMS Right Not Reconned =Left Not Reconned Left Mainstem Spawning RMS MMS =Right Mainstem Spawning Middle Mainstem Spawning T + ....tt£.. Tributary River Mile Flow Direction 1 ]1 1 J I .~-j j 1 »-1 ., .......o....... Specific areas from river mile 144 to 148 ata mainstem discharge of 23000 cfs. LEGEND: L ""Left RNR ""Right Not Reconned RMS ""Right Mainstem Spawning T =Tributary R =Right LNR =Left Not Reconned MMS ""Middle Mainstem Spawning +""River Mile M ""Middle LMS =Left Mainstem Spawning ~=Flow Direction - APPENDIX 2 HABITAT INVENTORY TECHNIQUES " - HABITAT INVENTORY TECHNIQUES The habitat reconnaissance work was based on the premise that the habitat characteristics of each specific area could be averaged in order to develop a reliable composite description of the entire area.The intent was to describe the habitat in general terms (for example,mean reach velocity)and not to map localized habitat features. The habitat inventory forms (Figure 14)provided a framework for the field reconnaissance work.These forms were designed to facilitate a cost-effective means of gathering reliable field observations based on visual assessment and minimal field measurements. Several factors were considered whill~developing the habitat inventory form. These included:(1)the total time allocated for the habitat inventory task (approximately one month);(2)the large number of specific areas to be surveyed;(3)a limitation of approximately one hour per specific area; (4)the use of minimal field gear (for ease in maneuvering at each specific area and dur"ing helicopter transport);(5)compatibility with ADF&G data;and (6)ease in computer data management.The methods and field techniques for completing the habitat inventory form are described below. 103 Sheet 1 of __ Habitat Inventory Date: Time: R.M.: Category:_ Breached?Yes/No Location:_,_ Mainstem Discharge:_ Crew: ..... Mean Reach Velocity:Estimated/Measured Site Specific Discharge:Estimated/Measured Does Upwelling Occur?Ye:s(No/Cannot Be Detected Visually Do Tributaries Enter the Slough or Side Channel?Yes/No If Yes,Description of Tributary (size~location):_ -.Head Gage:_ Mid-Reach Gage:_ Mouth Gage: WSEl: WSEl: WSEL: Remarks: Substrate:1 2 3 4 5 6 7 8 9 10 11 12 13 Substrate Embeddedness:1 2 3 Dom.inant Cover Code:1 2 3 ,4 5 6 7 8 9 Percent Cover:1 2 3 4 5 6 Streambank Slope:LB 1 2 3 Stuble/Unstable RB 1 2 3 Stable/Unstable Streambank.Vegetation:LB 1 234 RB 1 2 3 4 Represent~ltive Top Width:Bankfull Top Width: Representative Depth:Bankfull Depth:,_ Water Clarity:Clear/Turbid ft. length of Backwater.Estimated/Measured Were Fish Observed?Yes/No Adult:Chinook Coho Sockeye_Chum __Pink _ Juvenile:Chinook Coho __Sockeye __Chum __Pink __ Remarks: FiourFl 14.....:1!:..l:O:.;;:;4 -"'"""'"'.='"'... ,~ I I ,.... Habitat Inventory Crew: Site Sketch &Habitat Mapping Sheet 2 of _ Date:_ Time: R.M.: Flow Description &Remarks Habitat Type Proportions: Habitat QuaUty Proportions: Figure 14 (cont) Pool 105 ___Run EWTAA Sheet 3 of __ Habitat Inventory - - - Crew: PHOTOGRAPHS No.Description Figure 14 (cont)106 Date:_ Time:_ R.M.: Film 1.0.No.:_ EWT&A _c ,~_ ,.... I Habitat Inventory Crew: DETAIL:Sketch and Description Figure 14 (cant) I 107 Sheet _of __ Date:_ Time:_ R.M.: EWT&A - - ...... Two field crews were in the helicopter for "initial morning flights.Upon reaching a spe!cific area,an overflight of the area provided an overview for determining features such as flm"patterns,breached or nonbreached conditions,backwater influence,etc.Low altitude aerial photos were taken at this time.The helicopter would then land and drop off the first crew to complete the ground survey and fill in the habitat inventory form.A separate form for each specific area was completed.The remaining crew would then proceed to the next specific area downstream of the first crew and complete that area.This "leap-frogging"down the river was a fast and efficient way of covering many specific areas each day.On the average,27 specific areas were visited per day.For a more detailed discussion of habitat reconnai ssance~methodo 1ogi es see Chamberl in 1981,and Shera and Hardi ng 1981. DESCRIPTION AND USE OF THE HABITAT INVENTORY FORM PAGE ONE Crew:A minimum of two people were sent to evaluate each specific area.Two people were important because of the subjectivity of the work.The ability to discuss the habitat and work out perceived differences helped remove individual bias from the data. R.M.:Each specific area was referenced to a river mile and with respect to the mainstem looking upriver:left (L),right (R),or middle (M)if between two mainstem forks . 108 Category:The perceived habitat transformation category of the specific area. Location:Designations commonly uSled to reference the specific area,if applicable. Mainstem Discharge:This data was obtained from USGS records for the Gold Creek gage. Breached:Whether the channel was breached or nonbreached. Mean Reach Velocity:Three methods were used to determine mean reach velocity.The first method involved estimating the surface velocity by recording the time it took a floating object to travel a known distance.The,- mean reach velocity was estimated as 85 percent of this surface velocity (linsley and Franzini 1979).The second method involved measuring the height (h)that water "climbed"a survey rod held perpendicular to the flow (i.e., .~conversion of kinetic energy to potential energy).The relationship between h and mean reach velocity is depicted in Figure 13.Tabulated values of velocity corresponding with particular heights appear ~n Table 19.On rare occasions,a Marsh McBirney Type 201 portable current meter with wading rod was used to measure velocity.Velocity was measured at a point 0.6 times the depth from the water surface elevation for depths less than or equal to 2.5 ft.Velocity was determined as the average of measurements made at 0.2 and 0.8 times the depth from the water surface elevation for depths greater than 2.5 ft.The Marsh McBi rney was used primarily to check the accuracy of the two approximate methods of estimatingl mean reach velocities. 109 - Site Specific Discharge:The discharge was estimated using the equation Q=V(W)(d),where V is estimated mean reach velocity (fps),W is the representative top width (ft),and d is the mean depth of the portion of the top width conveying most of the flow (ft). Does Upwell·jng Occur?:Visual detection was recorded as positive if actual upwelling was observed as a volcano-like structure in fine sediments.If an area was breached,turbidity made it difficult to visually determine if upwelling occurred.A response of IIcannot be detected visuallyll was then appropriate.A negative response was recorded only if a channel was dewatered or consisted of isolated pools. Do Tributaries Enter the Slough or Side Channel?:If one or more tributaries entered the specific area,a brief description of each was recorded. Information included where it entered the specific area,its estimated discharge,and the effect this additional inflow had on fish habitat. Head Gage,Mid-Reach Gage,Mouth Gage:One or more staff gages were occasionally in place within the specific area.If so,the water surface elevation and gage number was recolr"ded,as well as any remarks about the condition of the gage (e.g.,bent). Substrate:The coding scheme and methods chosen for this habitat inventory parameter corresponded directly with ADF&G field methods (Estes and Vincent-Lang 1984).The substrate type and corresponding code numbers are: 110 r Code 1 2 3 4 5 6 7 8 9 10 11 12 13 ~ Si 1t Silt and Sand Sand Sand and Small Gravel Small Gravel Small and Large Gravel Large Gravel Large Gravel and Rubble Rubble Rubble and Cobble Cobble Cobble and Boulder Boulder Size (inches) 1/8 - 1 1 - 3 3 - 5 5 -10 10+ """' This was one of the more difficult parameters to average for an entire specific area.For this reason,tw'o codes indicating substrate size were often chosen Clnd a map indicating substrate zones within the specific area was drawn on page two of the habitat inventory form. Substrate Embeddedness:Substrate embeddedness descri pt ions and thei r code numbers are: -Code 1 2 3 DE~scription Embedded,consolidated,and cemented Embedded but not cemented Not embedded ..... Embeddedness implies a larger substrate material partially or fully buried in smaller material.If a substrate constituent was not embedded in smaller material it l,alaS coded 3.Substrate that was partially embedded but not consolidated was coded 2.The deglree of consolidation was determined by trying to penetrate the upper substrate 1ayer with a boot.If the upper 111 layer was difficult to break through,then the substrate was considered cemented for a substrate embeddedness code of 1. Dominant Cover Code:The codes used were developed by ADF&G (Schmidt etal. 1984): Code 1 2 3 4 5 6 7 8 9 No Cover Emergent Vegetation Aquatic Vegetation Lclrge Gravel Rubble C()bb 1e/Bou 1der Debris/Deadfall Overhanging Riparian Undercut Banks More than one cover code was recorded if the avail ab 1e cover ina specifi c area was not dominated by one type. Percent Cover:This code indicates the percent surface area available as cover to juvenile fish.These codes were developed by ADF&G (Schmidt et al. 1984): Code 1 2 3 4 5 6 Percent Cover 0··5 6··25 26-50 51-75 76-95 96-100 112 Streambank Sl(~:Streambank slope and stability for both the left and right banks was recorded.The slope was determined to be steep if the horizontal to vertical ratio was greater than or equal to 1:1 (code number 1);moderate if the ratio was between 1:1 and 20:1 (c:ode number 2);and flat if the ratio was greater than 20:1 (code number 3).The streambank stability was determined by observing the composition of each bank.Sandy banks and broad,flat gravel bars were considered the least stable,while rocky or heavily vegetated banks were considered stable. Streambank Vegetation:The vegetatiion for each bank was described by the following codes: Code 1 2 3 4 Description Less than 50 percent of streambank vegetated Dominant vegetation is grass Dominant vegetation is shrub Dominant vegetation is of tree form ...... - Two or more codes were used if one code did not adequately describe the vegetation.The areas of differing vegetation were then noted on page two of the habitat inventory form. Representative Top Width,Bankfull Top Width,Representative Depth,and' Bankfull Depth:Depth was measured using a yardstick or surveyor rod and distances were determined using either a Ranging 600 range finder or fiberglass tape.Bankfull top widths and bankfull depths were sometimes impossible to measure.A shoal for example has only one bank and top widths and depths are therefore not appl iCCtble.Some difficulty in deternrining the 113 water 1i ne for bankfull depths wa.s encountered.Thi s was overcome by observing indicators such as debris lines,water stained or dirty rocks, damage to strE~ambank vegetation,or channel morphology. Water Clarity:Water within each specific area was identified as clear or turbid.If turbid,the depth,in feet,of how far one could see into the water was determined by reading the lowest visible mark on a survey rod or ya rdstick. Length of Backwater:The intrusion of backwater was either measured or estimated,in feet,from the point of the confluence with the mainstem. I'''''' Were Fish Observed?:Determination of fish presence was through visual observation.Information recorded included the presence or absence of fish, whether the fish was an adult or juvenile,the species,the abundance,and the activity (spawning adults for example).To ensure positive identification of --juvenile fish,attempts were made to capture a sample using either a beach seine or a hl~l1d-held dip net.The beach seine,used primarily in turbid ..... water,proved to be too time-consuming.The use of this form of capture was discontinued after the first field trip . .-PAGE TWO - -i i Site Sketch and Habitat Mapping:A sketch of each specific area was made. Additionally,any notes on plan form;habitat types;discharge;velocities; size of pools,riffles,runs,and their relative proportions;fish usage; 1.14 general slope or gradient of the streambed;substrate;vegetation;fish activities;or other information which would help characterize the habitat was recorded. Habitat Type Proportions:After the first field trip this parameter was added.An estimate of the percentage of pool and/or riffle and/or run was recorded. Habitat Quality Proportions:Habitat quality proporti ons were recorded for juvenile chinook salmon according to the following codes: Code 1 2 3 4 5 Description No habitat value Habitat quality was poor Habitat quality was fair Habitat quality was good Habitat quality was excellent For example,a specific area could have been recorded as 20%,code 2,poor habitat;30%,code 3,fair habitat;and 50%,code 4,good habitat.Habitat quality proportions were subjective evaluations based on knowledge of fishery habitats. PAGE THREE Photographs were described and recorded on this page.Photographs were taken to help describe the specific area in general,or a particular feature of the area (such as substrate). 115 PAGE FOUR This page was used for additional notes or detailed drawings to further describe a specific area. ~ i 116 --.,..-------------~-------___..,_..,.i---~--"'F,.---------·------------- APPENDIX 3 AQUATIC HABITAT TRANSFORMATIONS OF SPECIFIC AREAS OF THE MIDDLE SUSITNA RIVER AT SEVERAL MAINSTEM DISCHARGES REFERENCED TO 23000 CFS APPENDIX 3 Aquatic Habitat Transformations of Specific Areas of the Middle Susitna River at Several Mainstem Discharges Referenced to 23000 cfs Mainstem Q(cfs) River Mile 2~3000 18000 16000 12500 10600 9000 7400 5100 100.40 R SC 4 4 2 2 2 2 2 100.60 R SS 1 1 1 1 1 1 1 100.60 L SC 4 4 4 4 3 3 3 100.70 R MS 10 10 4 4 4 4 4 101.20 R SC 4 4 4 4 2 2 2 101.30 M SC 4 4 4 4 9 9 9-101.40 L SC 2 2 2 2 2 2 2 101.50 L MS 10 10 10 10 4 4 4 101.60 L SC 4 4 2 2 2 2 2 101.70 L SC 4 4 4 4 3 3 3 r-o 101.71 L MSS 8 8 8 8 9 9 9 101.80 L SC 2 2 2 2 2 2 2 102.00 L SC 4 4 4 4 9 9 9 102.20 L US 1 1 1 1 1 1 1 102.60 L SC 4 4 4 4 4 4 3 104.00 R IMS 6 6 6·6 6 6 6 104.30 M SC 3 3 9 9 9 9 9 105.20 R US 1 1 1 1 1 1 1 105.70 R MS 10 10 10 10 10 10 10 105.81 L MSS 6 6 6 6 6 6 6 106.30 R SC 4 4 4 4 4 4 4 107.10 L SC 4 4 4 4 3 9 9 107.60 L US 1 1 1 1 1 1 1....108.30 L US 1 1 1 1 1 1 1 108.70 L MS 10 10 4 4 4 4 4 108.90 L MS 10 10 10 10 10 10 10 ~109.30 M MSS 6 6 6 6 9 9 9 109.40 R MS 10 10 10 10 10 10 10 109.50 M SC 4 4 9 9 9 9 9 110.40 L SC 4 4 4 2 2 2 2 ~110.80 M SC 4 4 4 4 4 4 4 111.00 R MS 10 10 10 10 10 10 10 111.50 R MS 10 10 4 4 4 4 4 111.60 R MSS 6 6 6 8 8 9 9 112.40 L SC 9 9 9 9 9 9 9 112.50 L US 1 1 1 1 1 1 1 112.60 L MS 4 4 4 4 4 4 4 Habitat Type at Reference Flow SC =Side Channel IMS =Indistinct Mainstem SS =Side Slough MSS =Mainstem Shoal US =Upland Slough ISC =Indistinct Side Channel MS =Mainstem 118 - River Mile 23000 18000 16000 12500 10600 9000 7400 5100 113.10 R SS 1 1 1 1 1 1 1 113.60 R IMS 6 6 6 6 8 8 8 113.70 R SS 1 1 1 1 1 1 1 113.80 R IMS 6 6 6 6 6 6 6 113.90 R IMS 6 6 6 6 6 6 8 114.00 R MS 4 4 4 4 4 4 4 114.10 R ISC 5 5 5 5 5 5 5 115.00 R SC 4 4 4 2 2 2 2 115.60 R SC 2 2 2 2 2 2 2 116.80 R MS 10 10 4 4 4 4 4 117.00 M ISC 6 6 8 8 8 9 9 F'"117.10 M SC 4 4 3 3 3 3 3 117.20 M SC 3 9 9 9 9 9 9 117.70 L IMS 6 6 5 5 5 5 5 117.80 L SC 4 4 4 4 4 2 2 117.90 R SC 4 4 4 4 4 4 3 117.90 L SC 2 2 2 2 2 2 2 118.00 L SC 3 3 3 3 3 3 3 118.60 M ISC 5 5 8 8 8 8 8 118.91 L MSS 6 6 6 6 6 6 6 119.11 L MSS 6 6 6 6 6 6 6 ~119.20 R SC 4 4 4 4 3 3 3 119.30 L SC 4 4 2 2 2 2 2 119.40 L US 1 1 9 9 9 9 9 119.50 L SC 4 4 4 4 4 4 4 ~...119.60 L SC 4 4 4 4 4 4 4 119.70 L SC 2 2 2 2 2 2 2 119.80 L SC 4 4 9 9 9 9 9 120.00 R US 1 1 1 1 1 1 1 120.00 L SC 4 4 3 3 3 9 9 121.10 R IMS 6 6 6 6 6 6 5 .-121.10 L S,C 4 4 4 4 4 4 3 121.50 R SC 3 3 3 3 9 9 9 121.60 R SC 4 4 3 3 9 9 9 121.70 R MS 10 10 4 4 4 4 4 121.80 R SC 3 3 3 3 3 3 3 121.90 R US 1 1 1 1 1 1 1 122.40 R SS 1 1 1 1 1 1 1 122.50 R SC 2 2 2 2 2 2 2 123.00 L SC 4 4 4 4 4 4 4 123.10 R US 1 1 1 1 1 1 1 123.20 R ISC 8 8 8 8 8 8 9 123.30 R US 1 1 1 1 1 1 1 123.60 R SS 1 1 1 1 1 1 1 Habitat Type at Reference Flow SC =Side Channel IMS =Indistinct ~ainstem SS =Side Slough MSS =Mainstem Shoal US =Upland Slough ISC =Indistinct Side Channel MS =Mainstem -, ,119 --~"""'""""'- River Mile 23000 18000 16000 12500 10600 9000 7400 5100 124.00 M ISC 7 7 7 7 7 7 7 124.10 L MS 10 10 10 10 10 10 4 124.80 R ISC 8 8 8 8 8 8 9 125.10 R SC 2 2 2 2 2 2 2 125.20 R MS 4 4 4 4 4 4 4 125.60 L MSS 6 6 6 6 5 5 5 125.60 R SS 9 .9 9 9 9 9 9 125.90 R SS 1 1 1 1 1 1 1 126.00 R SS 1 1 1 1 1 1 1 126.30 R SS 1 1 1 1 1 1 1 127.00 M SC 4 4 4 4 4 4 4 ~'IiIIi 127.10 M IMS 6 6 6 5 5 5 5 127.20 M US 1 1 1 1 1 1 1 127.40 L MS 10 10 10 10 10 4 4 ~127.50 M ISC 6 6 6 6 5 5 5 128.30 R IMS 6 6 6 6 6 6 6 128.40 R MSS 6 6 6 5 5 9 9 128.50 R SC 4 4 4 4 2 2 2-128.70 R SC 4 4 2 2 2 2 2 128.80 R SC 4 2 2 2 2 2 2 129.30 L IMS 10 10 10 10 5 5 5 129.40 R US 1 1 1 1 1 1 1 129.50 R ISC 6 6 5 5 5 5 5 129.80 R MS 10 10 10 10 10 10 10 130.20 R SC 4 4 4 2 2 2 2 130.20 L SC 4 4 4 4 4 3 3 131.20 R IMS 5 5 5 5 5 5 5 131.30 L SC 4 4 4 4 4 2 2 ~131.70 L SC 4 4 4 4 4 4 4 131.80 L SS 1 1 1 1 1 1 1 132.50 L SC 4 4 9 9 9 9 .g 132.60 L SC 4 4 4 4 3 3 3 132.80 R IMS 7 7 7 7 7 7 7 133.70 R .SC 4 4 4 2 2 2 2 133.80 L SC 4 2 2 2 2 2 2 133.81 R MSS 6 6 6 6 6 6 6 133.90 R SS 1 1 1 1 1 1 1 133.90 L US 1 1 1 1 1 1 1 134.00 L US 1 1 1 1 1 1 1 134.90 R SC 4 4 4 4 4 4 4 135.00 R SC 9 9 9 9 9 9 9,....135.00 L MS 10 10 10 10 10 10 10 135.10 R SC 3 3 3 3 3 3 3 135.30 L SC 3 3 3 3 3 3 3 135.50 R US 9 9 9 9 9 9 9 Habitat Type ,at Reference Flow SC =Side Channel IMS =Indistinct Mainstem SS =Side Slough MSS =Mainstem Shoal US =Upland Slough ISC =Indistinct Side Channel MS =Mainstem- 120 ~- _Nl!1'___ -";:p1"lIE"!I77j1<l1i4 River-Mile 23000 18000 16000 12500 10600 9000 7400 5100 135.60 R SS 1 1 1 1 1 1 1 135.70 R SS 1 1 1 1 1 1 1 136.00 L SC 4 4 4 4 4 4 4 136.30 R SC 4 4 2 2 2 2 2 136.90 R US 1 1 1 1 1 1 1 ~137.20 R SC 4 4 4 4 2 2 2 137.50 R SC 2 2 2 2 2 2 2 137.50 L S5 1 1 1 1 1 1 1 137.80 L SC 2 2 2 2 2 2 2 137.90 L SC 2 2 2 2 2 2 2 138.00 L SC 4 4 4 4 4 2 2 .-138.71 L MSS 6 6 6 6 6 6 6 138.80 R IMS 6 5 5 5 5 5 9 139.00 L US 1 1 1 1 1 1 1 139.01 L MSS 6 6 6 6 6 6 6 139.20 R IMS 6 6 6 6 6 6 6 139.30 L MSS 6 6 6 6 6 6 6 139.40 L SC 4 4 4 4 4 4 4 ,~139.41 L MSS 6 6 6 6 6 6 6 139.50 R IMS 6 6 6 5 5 7 7 139.60 L MS 10 10 10 10 10 10 4 ~139.70 R SC 2 2 2 2 2 2 2 139.90 R US 1 1 1 1 1 1 1 140.20 R SS 1 1 1 1 1 1 1 140.40 R IMS 6 6 6 6 6 6 6 140.60 R ISC 6 6 5 8 8 9 9 141.20 R IMS 6 6 6 5 5 5 5 141.30 R IMS 5 5 5 5 5 5 5 141.40 R SC 4 4 4 2 2 2 2 141.60 R ISC 7 7 7 7 7 7 7 142.00 R ISC 5 5 5 5 8 8 8 142.10 R SS 1 1 1 1 1 1 1 142.20 R SS 1 1 1 1 1 1 1 142.80 R IMS 6 6 6 6 6 6 6 142.80 L MSS 6 6 6 6 6 6 6 143.00 /.;MSS 6 6 6 6 6 6 7 143.40 L SS 1 1 1 1 1 9 9 144.00 R MS 10 10 10 10 10 10 10 144.00 M SC 9 9 9 9 9 9 9 144.20 L MS 10 10 10 10 10 10 10 144.40 L SC 2 2 2 2 2 2 2 ~145.30 R MS 10 10 10 10 10 10 4 145.60 R SC 9 9 9 9 9 9 9 146.60 L SS 1 9 9 9 9 9 9 147.10 L MS 10 10 10 10 10 10 10 148.20 R MSS 6 6 6 9 9 9 9 ~Habitat Type at Reference Flow 5C =Side Channel IMS =Indistinct Mainstem SS =Side Slough MSS =Mainstem Shoal US =Upland Slough....ISC =Indistinct Side Channel MS =Mainstem 121 - APPENDIX 4 APPROXIMATE BREACHING FLOWS OF SPECIFIC AREAS OF THE MIDDLE SUSITNA RIVER APPENDIX 4 Approximate Breaching Flows of Specific Areas of the Middle Susitna River River Breaching Model River Breaching Model Mile Flow Type Mile Flow Type 100.40 R 12500 113.80 R <5100 100.60 R 33000 113.90 R 7000 100.60 L 9200 114.00 R <5100 100.70 R <5100 114.10 R <5100 DIHAB 101.20 R 9200 I FG 115.00 R 12000 DIHAB 101.30 M 9200 115.60 R 23000~101.40 L 22000 RJHAB 116.80 R <5100 101.50 L <5100 IFG 117.00 M 15500 101.60 L 14000 117.10M 15500 101.70 L 9600 117.20 M 20000 101.71 L MSS DIHAB 117.70 L <5100 101.80 L 22000 117.80 L 8000 102.00 L 10000 117.90 R 7300 102.20 L >35000 117.90 L 22000 102.60 L 6500 118.00 L 22000 104.00 R <5100 118.60 M 14000 104.30 M 21000 118.91 L MSS DIHAB 105.20 R >35000 119.11 L MSS DIHAB 105.70 R <5100 119.20 R 10000 IFG-105.81 L MSS DIHAB 119.30 L 16000 106.30 R 4800 119.40 L >35000 107.10 L 9600 119.50 L 5000 ,lFQi 107.60 L >35000 RJHAB 119.60 L <5100 108.30 L >35000 119.70 L 23000 108.70 L <5100 119.80 L 15500-108.90 L <5100 120.00 R >35000 109.30 M MSS 120.00 L 12500 109.40 R <5100 121.10 R <5100 109.50 M 16000 121.10 L 7400 110.40 L 12000 121.50 R 19500 110.80 M <5100 121.60 R 15500 111.00 R <5100 121.70 R <5100 111.50 R <5100 121.80 R 22000 111.60 R 11500 121.90 R >35000 112.40 L 22000 122.40 R 26000 112.50 L >35000 RJHAB 122.50 R 20000 112.60 L <5100 IFG 123.00 L <5100 113.10 R 26000 123.10 R >35000 113.60 R 10500 123.20 R 23000 113.70 R 24000 RJHAB 123.30 R ::>35000 ..-MSS =Mainstem Shoal RJHAB =ADF&G Habitat Model DIHAB =EWT&A Direct Input Habitat Model IFG =Instream Flow Group 123 -~~~....-r-' ..... I River Breaching Model River Breaching Model Mile Flow Type Mile Flow Type 123.60 R 25500 135.60 R >35000 124.00 M 23000 135.70 R 27500 124.10 L <5100 136.00 L <5100 IFG 124.80 R 19500 136.30 R 13000 IFG 125.10 R 20000 136.90 R >35000 125.20 R <5100 DIHAB 137.20 R 10400 125.60 L <5100 137.50 R 22000 DIHAB 125.60 R 26000 137.50 L 29000 ,""125.90 R 26000 137.80 L 20000 126.00 R 33000 IFG 137.90 L 21000 126.30 R 27000 138.00 L 8000 ~127.00 M <5100 138.71 L MSS DIHAB 127.10 M <5100 138.80 R 6000 127.20 M >35000 139.00 L ;.35000-127.40 L <5100 139.01 L MSS DIHAB 127.50 M <5100 139.20 R <5100 128.30 R <5100 139.30 L MSS 128.40 R 9000 139.40 L <5100 ~128.50 R 10400 139.41 L MSS DIHAB 128.70 R 15000 139.50 R 8900 128.80 R 16000 IFG 139.60 L <5100 129.30 L <5100 139.70 R 22000 129.40 R >35000 139.90 R >35000 129.50 R <5100 140.20 R 26500 129.80 R <5100 140.40 R <5100 130.20 R 12000 DIHAB 140.60 R 12000 130.20 L 8200 141.20 R <5100 131.20 R <5100 141.30 R <5100 .[i!III3l\131.30 L 9000 DIHAB 141.40 R 11500 IFG 131.70 L 5000 IFG 141.60 R 21000 IFG 131.80 L 26900 142.00 R 10500 r-132.50 L 14500 142.10 R 23000 132.60 L 10500 IFG,RJHAB 142.20 R 26000 132.80 R 19500 142.80 R <5100 133.70 R 11500 142.80 L MSS 133.80 L 17500 IFG 143.00 L 7000 133.81 R MSS DIHAB 143.40 L 23000 133.90 R 30000 144.00 R <5100.-133.90 L >35000 144.00 M 22000 134.00 L >35000 144.20 L <5100 134.90 R <5100 IFG 144.40 L 21000 RJHAB.....135.00 R 21500 145.30 R <5100 135.00 L <5100 145.60 R 22000 135.10 R 20000 146.60 L 26500 135.30 L 23000 147.10 L <5100 IFG 135.50 R "35000 148.20 R MSS !""'"RJHAB =ADF&G Habitat Model MSS =Mainstem Shoal DIHAB =EWT&A Direct Input Habitat Model IFG =Instream Flow Group 124 - - - - APPENDIX 5 FISH OBSERVATIONS ..... APPENDIX 5 FISH OBSERVATIONS All fish observations made during the field reconnaissance are presented below.Most observations were made late in the spawning season. - Consequently,some of the specific areas may have had spawning activity before the field investigations took place.There were no fish observed in 58 (34%) of the 172 specific areas visited during the field work.Fish observations included an estimate of numbers,species,and life stage (i.e.,adult or juvenile),as well as any spawning activity and the number of redds observed. 126 ADULT AND JUVENILE SALMON OBSERVATIONS HABITAT INVENTORY 8-21-84 THROUGH 10-2-84 RM =River Mi"I e L =Left Bank Looking Upstream R =Right Bank Looking Upstream M =Middle of River (usually island) *=Spawning Activity Observed As Indicated by the Presence of Redds or Spawning Behavior. r- I I - SPECIFIC AREA (RM) 100.4R 100.4R 100.5R 100.6R* 100.6R* 100.6L 101.2R* 101.3L 101.4L* 101.4L* 101.6L 101.6L * 101.7L 101.8L* 101.8L* 102.0L 102.2L* 102.2L* 105.2R 107.1L 107.6L 109.3M 109.5M 110.4L 111.5R 111.5R 111.6R DATE 09-11-84 10-02-84 09-11-84 08-22-84 10-02-84 09-11-84 09-11-84 09-11-84 09-10-84 08-22-84 08-22-84 09-10-84 09-10-84 09-10-84 10-02-84 09-10-84 09-10-84 10-02-84 09-10-84 09-10-84 09-10-84 09-10-84 09-10-84 08-22-84 09-06-84 10-01-84 09-06-84 OBSERVATIONS Lots of coho juveniles One unidentified juvenile in pool (dry channel) Chum salmon adults Chum salmon adults,unidentified juveniles,redds Unidentified juveniles,several redds,scattered salmon eggs Pink and chum adults,few unidentified juveniles Twenty+chlJm .adults and several redds Two dead chum,1 dead pink Coho juvenile (dead),juvenile chinooks Chum,pink adults,several unidentified juveniles About 10 chum adults Spawning chum,adult sockeye,numerous unidentified juvenil es One adult chum,1 chum carcass Hundreds of juvenile (coho),3 adult sockeye,3 adult chum Lots of unidentified juvenile salmonids One unidentified juvenile salmonid,2 unidentified carcasses Thousands of salmonid juveniles (identified 2 coho and 1 sockeye Hundreds of unidentified salmonid juveniles,15 redds, 1 sockeye adult,2 chum adults,1 dead pink Few juveniles (chino,coho) Chum and pink carcasses One pink carcass,several juveniles (2 identified as coho) One chum carcass One chum carcass One chum adult,1 chum carcass Several chum carcasses,couple of unidentified juveniles Several chum carcasses,lots of unidentified juveniles Three chum carcasses 127 ..... SPECIFIC AREA (RM) 112.5L 112.5L 112.5L 112.6L 112.6L 113.6R 113.7R* 113.7R* 113.7R* 114.OR 114.1R 115.0R* 115.0R* 115.0R* 115.6R* 116.3R 117.OM 117.1M 117.1M 117.2M 117.85L 117.9R 117.9L* 118.91L* 119.11L* 119.2R 119.3L* 119.4L 119.4L* 119.5L 119.7L 120.0L 120.0R* 121.1L* 121.5R 121.6R 121.7R 121.8R* 121.8R* 121.9R* DATE 09-06-84 09-06-84 08-22-84 09-06-84 09-11-84 09-06-84 09-06-84 08-22-84 09-11-84 09-06-84 09-06-84 09-06-84 08-22-84 09-06-84 09-06-84 09-06-84 09-06":84 09-06-84 08-22-84 09-06-84 10-01-84 09-06-84 09-06-84 09-07-84 09-07-84 09-07-84 09-07-84 09-07-84 08-22-84 09-07-84 09-07-84 09-07-84 09-07-84 09-07-84 09-07-84 09-07-84 09-07-84 08-22-84 09-07-84 09-07-84 OBSERVATIONS Several unidentified juveniles Thousands of juveniles unidentified Unidentified juveniles Several juvenile chinook Juvenile salmonids -unidentified Chum and pink carcasses - 1 juvenile unidentified About 40 adult chum,lots of juveniles (chinook and coho) About 50 adult chum Greater than 20 adult chum,redds,juvenile chinook, coho,sockeye Chum carcasses,1 adult chum,chinook juvenile (1) One chum carcass Fourteen+adu"lt chums,1 sockeye adult,1 unidentified juvenil e Several adult chums Several chinook juveniles,1 rainbow juvenile Sixty+adult chum,several chinook juveniles,1 rain- bow juvenile One chum carcass,several unidentified juveniles Several chum carcasses Chinook juveniles Several unidentified juveniles Scattered eggs Chinook and coho juveniles Adult coho (in tributary),chum carcass,unidentified juveniles Two coho juveniles About 16 chum adults About 6 chum adults,3 redds Several unidentified juveniles Two chum adults,chinook and sockeye juveniles, 1 grayl i ng A few unidentified juveniles Redds Several chinook juveniles and unidentified Coho juveniles Unidentified juveniles One redd observed One chum adult,2 unidentified juveniles Chinook juveniles Chinook juveniles Chum adults,chinook juveniles Chum adults,unidentified juveniles Greater than 40 chum adults One chum carcass,chinook juvenile,obvious spawning acti vity 128 ,~ ..... r ..... .... SPECIFIC AREA (RM) 122.4R* 122.5R* 122.5R* 123.1R 123.1R 123.2R 123.3R 123.6R* 123.6R* 124.0M 125.1R 125.1R 125.2R 125.9R* 125.9R* 126.0R* 126.0R* 126.3R* 127.0L 127.4M 127.5M 128.3R 128.5R 128.7R* 128.8R* 128.8R* 129.4R* 129.5R 129.5R 130.2R* 130.2L* 131.3L * 131.7L* 131.8L* 132.6L 132.8R* 133.7R* 133.7R* 133.8R 133.8L 133.8L 133.9R* 133.9L* DATE 09-07-84 09-07-84 08-21-84 09-07-84 09-30-84 09-07-84 09-30-84 08-21-84 09-07-84 09-07-84 09-05-84 09-05-84 09-05-84 08-21-84 09-05-84 09-05-84 08-21-84 08-05-84 09-05-84 09-05-84 09-05-84 09-05-84 09-05-84 09-05-84 08-21-84 09-05-84 09-05-84 09-05-84 09-30-84 09-05-84 09-05-84 09-05-84 09-04-84 09-04-84 09-05-84 09-05-84 08-21-84 09-04-84 09-04-84 08-21-84 09-05-84 09-04-84 09-04-84 OBSERVATIONS Several chum adults,several redds,coho juvenile About 150 chum adults,unidentified juveniles,chinook juvenile Chum adults Several unidentified juveniles ~1any unidentified juveniles Several chinook and coho juveniles,1 grayl"ing juvenile One unidentified juvenile Sockeye and chum adults Chum adults,chinook and coho juveniles Several chinook juveniles Two chum carcasses Several unidentified juveniles One chum adult,few unidentified juveniles Few sockeye adults,75+chum adults,school of unidentified juveniles Sockeye and chum adults Sockeye and chum adults,several unidentified juveniles Some sockeye adults,few pink adults,hundreds of chum adults Sockeye and chum adults One chum carcass,several unidentified juveniles Several unidentified juveniles One chum carcass One chum,chinook juveniles Chinook juveniles Chum adults Several adult chums Several unidentified juveniles Several chum adults,unidentified juveniles Chum adults One coho carcass Chum adults,chinook juveniles One chum carcass,unidentified juveniles (1 chinook identified) Chum adults,redds Lots of chum adults,few unidentified juveniles About 20 chum adults,lots of redds,1 unidentified juvenile Unidentified juveniles Chum adults,1 dead chinook juvenile Some chum adults Chum adults,few chinook juveniles Chum adults,1 unidentified juvenile Chum adult Chinook juveniles Chinook juveniles Chum adults,chinook juveniles 129 - .- f ..... I .... n I I SPECIFIC AREA (RM) 134.0L 134.9R* 134.9R* 135.0l* 135.1R 135.6R* 135.6R* 135.7R 136.0L 136.3R* 137.2R* 137.5R 137.SL 137.9L 138.7L 139.01L* 139.0L* 139.4l 139.5R 139.6L 139.9R* 140.2R* 140.2R* 140.6R* 141.4R* 141.6R* 142.0R 142.0R 142.1R* 142.8L* 143.0L* 143.4L* 144.2L 144.4L* 145-:6R DATE 09-04-84 08-21-84 09-04-84 09-04-84 09-04-84 09-04-84 08-21-84 08-21-84 09-04-84 09-04-84 09-04-84 09-04-84 09-04-84 08-21-84 09-04-84 09-04-84 08-21-84 09-03-84 09-03-84 09-03-84 09-03-84 08-21-84 09-03-84 09-03-84 09-03-84 08-21-84 09-03-84 09-29-84 09-03-84 09-03-84 09-03-84 09-03-84 09-03-84 08-21-84 08-21-84 OBSERVATIONS One chum carcalss~few unidentified juveniles One chum adult,1 chum carcass Several chum aldults,several unidentified juveniles Chinook and unidentified juveniles Several unidentified juveniles Hundreds of sockeye adults,thousands of chum adults, chinook juveniles Sockeye,chum,pink adults greater than 400 fish Some chum adults,2 pink carcasses,several unidentified juveniles (1 chinook) Two chum carCC:lsses,uni dentifi ed adults Chum adults,chinook juveniles Chum adults,2 unidentified juveniles Chum adults,2 chum carcasses,chinook juveniles Chum carcasses,chinook juveniles Few unidentified juveniles One chum carcass~1 unidentified adult About 30 chum adults Some sockeye adults,SO+chum adults,1 pink carcass Several chum carcasses,several unidentified juveniles (1 chinook identified) Sockeye and chum adults Several chum carcasses,several unidentified juveniles (1 chinook identified) Sockeye and chum adults,chinook juveniles Lots of chum adults,lots of unidentified juveniles About 12 chum adults,lots of coho and chinook juveniles Several chum carcasses,redds,few unidentified adults (1 chinook identified) Hundreds to thousands of sockeye and chum adults, chinook juveniles Some sockeye cidults ~hundreds of chum adults, 1 unidentified juvenile Chum adults,unidentified juveniles Fifteen+unidentified juvenile fish Sockeye and chum adults,greater than 500 chinook juveniles,several unidentified juveniles Fifty+chum adults Twelve+chum adults,unidentified juveniles Thi rty-two+chum adults,uni dentifi ed j uvenil es (1 chinook identified) Chum carcass,chinook juveniles Fifty+chum adults One chinook juvenile 130