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Susitna-Watana Hydroelectric Project Document
ARLIS Uniform Cover Page
Title:
Alaska Energy Authority response to National Marine Fisheries Service and
U.S. Fish and Wildlife Service February 5, 2013 interim comments on the
characterization and mapping of aquatic habitats revised study plan (RSP
Section 9.9)
SuWa 21
Author(s) – Personal:
Author(s) – Corporate:
Alaska Energy Authority
AEA-identified category, if specified:
AEA-identified series, if specified:
Series (ARLIS-assigned report number):
Susitna-Watana Hydroelectric Project document number 21
Existing numbers on document:
Published by:
[Anchorage, Alaska : Alaska Energy Authority, 2013]
Date published:
March 2013
Published for:
Prepared for Alaska Energy Authority
Date or date range of report:
Volume and/or Part numbers:
Attachment E
Final or Draft status, as indicated:
Document type:
Pagination:
5, 3 p.
Related work(s):
Cover letter (SuWa 16), Attachments A-D (SuWa 17-20)
Pages added/changed by ARLIS:
Added cover letter
Notes:
All reports in the Susitna-Watana Hydroelectric Project Document series include an ARLIS-
produced cover page and an ARLIS-assigned number for uniformity and citability. All reports
are posted online at http://www.arlis.org/resources/susitna-watana/
March 1, 2013
Ms. Kimberly D. Bose
Secretary
Federal Energy Regulatory Commission
888 First Street, NE
Washington, DC 20426
Re: Susitna-Watana Hydroelectric Project, FERC Project No. 14241-000;
Submittal of Information Related to Study Plan Determination
Dear Secretary Bose:
By letter dated January 17, 2013, Staff of the Federal Energy Regulatory
Commission (Commission) revised the licensing schedule for the Alaska Energy
Authority’s (AEA) proposed Susitna-Watana Hydroelectric Project, FERC Project No.
14241 (Project).1 Primarily, Commission Staff’s January 17th letter established a process
for its April 1, 2013 issuance of the Study Plan Determination (SPD) for 14 of the
individual study plans included in AEA’s Revised Study Plan (RSP),2 filed with the
Commission on December 14, 2012.3 Leading up to Staff’s April 1 SPD, the January
17th letter required AEA to prepare and file, following consultation with licensing
participants, additional information that Commission Staff have deemed necessary for the
April 1 SPD. The purpose of this filing is to submit the information required by Staff’s
January 17th letter, as well as other relevant information in support of these 14 study
plans.
1 Letter from Jeff C. Wright, Federal Energy Regulatory Commission, to Wayne Dyok, Alaska Energy
Authority, Project No. 14241-000 (issued Jan. 17, 2013) [hereinafter, “January 17th Letter”].
2 Commission Staff’s January 17th letter established April 1 as the SPD date for 13 of the individual
studies in the RSP. January 17th Letter, Attachment A. When issuing the SPD for the other individual
study plans in the RSP, however, Commission Staff postponed its determination on one additional study
until the April 1, 2013 SPD. Letter from Jeff C. Wright, Federal Energy Regulatory Commission, to
Wayne Dyok, Alaska Energy Authority, at 3, Project. No. 14241-000 (issued Feb. 1, 2013). In total, the 14
individual studies scheduled for Staff’s April 1st SPD consist of the following: (1) Baseline Water Quality
(RSP 5.5); (2) Water Quality Modeling Study (RSP 5.6); (3) Mercury Assessment and Potential for
Bioaccumulation Study (RSP 5.7); (4) Geomorphology Study (RSP 6.5); (5) Fluvial Geomorphology
Modeling Below Watana Dam Study (RSP 6.6); (6) Groundwater Study (RSP 7.5); (7) Ice Processes in the
Susitna River Study (RSP 7.6); (8) Fish and Aquatics Instream Flow Study (RSP 8.5); (9) Riparian
Instream Flow Study (RSP 8.6); (10) Study of Fish Distribution and Abundance in the Upper Susitna River
(RSP 9.5); (11) Study of Fish Distribution and Abundance in the Middle and Lower Susitna River (RSP
9.6); (12) River Productivity Study (RSP 9.8); (13) Characterization and Mapping of Aquatic Habitats
(RSP 9.9); and (14) Riparian Vegetation Study Downstream of the Proposed Susitna-Watana Dam (RSP
11.6).
3 Revised Study Plan, Project No. 14241-000 (filed Dec. 14, 2012) [hereinafter, “RSP”].
2
As required by Commission Staff’s January 17th letter, AEA hereby submits the
following documents:
Requested Information 4 Attachment
Final implementation plan for Study of
Fish Distribution and Abundance in the
Upper Susitna River (RSP 9.5)
Attachment A, Final Susitna River Fish
Distribution and Abundance
Implementation Plan (March 2013)
Final implementation plan for Study of
Fish Distribution and Abundance in the
Middle and Lower Susitna River (RSP 9.6)
Attachment A, Final Susitna River Fish
Distribution and Abundance
Implementation Plan (March 2013)
Final implementation plan for River
Productivity Study (RSP 9.8)
Attachment B, Final Susitna River
Productivity Study Implementation Plan
(March 2013)
Final focus areas for 2013 middle and
lower river studies
Attachment C, Technical Memorandum,
Selection of Focus Areas and Study Sites in
the Middle and Lower Susitna River for
Instream Flow and Joint Resource Studies
– 2013 and 2014 (March 2013)
As directed in Staff’s January 17th letter, AEA on January 31, 2013, filed drafts of
all these documents with the Commission and distributed them to licensing participants
via its licensing website, http://www.susitna-watanahydro.org/meetings/. Also in
conformance with Staff’s January 17th letter, AEA held technical workgroup (TWG)
meetings on February 14th and 15th “to discuss the study results, proposed
implementation plans, and selected focus areas in the middle and lower Susitna River.”5
Because Staff of the National Marine Fisheries Service (NMFS) were unavailable to meet
on February 14-15 due to a preexisting scheduling conflict, AEA met separately with
NMFS on February 7th and 8th to review these materials.
In accordance with Commission Staff’s revised licensing schedule, licensing
participants may file comments on the attached implementation plans and technical
memorandum—as well as the 14 studies subject to Staff’s April 1st RSP6—by March 18,
2013.7 Based on the technical information discussed in the February 7 -8 and 14-15
meetings, AEA has made changes to the attached implementation plans and technical
memo since the drafts of these were filed and distributed on January 31.
AEA also has attached two additional documents related to Commission Staff’s
April 1st SPD. First, based on RSP comments filed by the Alaska Department of
4 See January 17th Letter, Attachment A, at 5.
5 Id.
6 These 14 individual study plans can be found in AEA’s RSP, filed with the Commission on December
14, 2012. See supra note 2. The RSP can be accessed from the Commission’s eLibrary system or AEA’s
licensing website, http://www.susitna-watanahydro.org/type/documents/.
7 See January 17th Letter, Attachment A, at 5.
3
Environmental Conservation (DCE),8 AEA has prepared and included as Attachment D
an updated Quality Assurance Project Plan (QAPP) for the Baseline Water Quality Study
(RSP 5.5).9 The attached QAPP has been updated to conform with DEC’s Quality
Assurance Plan Review Checklist and Draft Guidance for a Tier 2 Water Quality
Monitoring QAPP.10 Second, as discussed in the meetings with NMFS on February 7-8
and the TWG on February 14-15, AEA has prepared and attached as Attachment E a
response to interim comments submitted by NMFS and the U.S. Fish and Wildlife
Service on Characterization and Mapping of Aquatic Habitat Mapping Revised Study
Plan (RSP 9.9), including a comparison table demonstrating that there is no significant
difference between AEA’s habitat classification system and the classification system
promoted by the resource agencies.
As always, AEA appreciates the participation and commitment to this licensing
process demonstrated by Commission Staff, federal and state resource agencies, and
other licensing participants. Following Commission Staff’s April 1st SPD, AEA looks
forward to working with licensing participants and Commission Staff in implementing
the approved studies, which AEA believes will comprehensively investigate and evaluate
the full range of resource issues associated with the proposed Project and support AEA’s
license application, scheduled to be filed with the Commission in 2015.
If you have questions concerning this submission please contact me at
wdyok@aidea.org or (907) 771-3955.
Sincerely,
Wayne Dyok
Project Manager
Alaska Energy Authority
Attachments
cc: Distribution List (w/o Attachments)
8 State of Alaska Resource Agency RSP Comments, Project No. 14241-000, at 3-6 (filed Jan. 18, 2013)
[hereinafter, “DEC RSP Comments”].
9 See RSP § 5, Attachment 5-1.
10 DEC RSP Comments, Attachments 1 & 2.
Attachment E
Response to Interim Comments on Characterization and Mapping
of Aquatic Habitat Mapping Revised Study Plan (RSP 9.9)
RESPONSE ON COMMENTS TO HABITAT MAPPING
Susitna-Watana Hydroelectric Project Alaska Energy Authority
FERC Project No. 14241 Page 1 March 2013
Alaska Energy Authority Response to National Marine Fisheries Service and U.S.
Fish and Wildlife Service February 5, 2013 Interim Comments on the
Characterization and Mapping of Aquatic Habitats Revised Study Plan (RSP
Section 9.9)
On February 5, 2013, National Marine Fisheries Service and U.S. Fish and Wildlife Service
(Services) filed with the Federal Energy Regulatory Commission (FERC) interim comments on
the Characterization and Mapping of Aquatic Habitats Revised Study Plan (RSP Section 9.9).
Through this document, Alaska Energy Authority (AEA) responds to these interim comments.
1. Services’ Comment: AEA’s proposed habitat classification system is not accurate or
useful for characterizing and mapping aquatic habitats.
AEA does not agree with the Services’ general premise that the stream habitat classification
system for tributaries and the mainstem, as presented in RSP 9.9, is inaccurate or not useful for
characterizing or mapping aquatic habitats. The classification system proposed in RSP 9.9 is
based on standard fundamentals for characterizing and mapping aquatic habitats, as described in
the scientific literature. This system is based on a habitat classification system developed by the
USFS for Alaska forested streams (USFS 2001) and has been applied throughout Alaska, often
with site-specific modification. Furthermore, this classification system is the product of
collaborative development with the Fish and Aquatic Technical Workgroup (TWG) that began in
April of 2012 and continued through the November 2012 TWG meeting when mesohabitat
refinements were proposed and discussed based on preliminary data from 2012 aerial mapping.
The adaption of this standardized and widely accepted habitat mapping system to the unique
aspects of the Susitna River is consistent with such scientific practices commonly applied in
hydroelectric project licensing.
2. Services’ Comment: AEA’s proposed habitat classification system is not nested and
is not hierarchical.
AEA does not agree that the classification system presented in RSP 9.9 is not nested or
hierarchical. In fact, there are five levels of classification, progressing from the largest scale of
river segment down to the mesohabitat level of pool, riffle, glide, etc. At the mesohabitat level,
15 different metrics of “microhabitat” are proposed for measurement. Habitat classification and
measured parameters in the mainstem, tributaries, and off-channel habitats are based on the
USFS (2001) tiered stream habitat survey protocol that have been refined with input from the
Fish and Aquatic TWG. Habitat classifications at the mainstem habitat level were defined to be
consistent with those used in the 1980s Susitna River studies. These definitions were discussed
and agreed upon during agency meetings in the spring of 2012. Tables 9.9-3 and 9.9-4 depicted
RESPONSE ON COMMENTS TO HABITAT MAPPING
Susitna-Watana Hydroelectric Project Alaska Energy Authority
FERC Project No. 14241 Page 2 March 2013
the nested classifications proposed by AEA for the Upper River tributaries and mainstem
habitats, respectively.
3. Services’ Comment: AEA’s proposed habitat classifications are not easily
identifiable and are not applicable for defining areas of species or lifestage
segregation by habitat or channel type.
AEA does not agree that the habitat classifications proposed in RSP 9.9 are not easily
identifiable and are not applicable for defining areas of species or lifestage segregation by habitat
or channel type. Habitat types can readily be identified using a combination of high-resolution
still imagery, low elevation aerial video, and ground mapping. The hierarchical and nested
levels of classification stratify the levels at which habitat selection might occur, both
longitudinally and laterally. The River Segment level stratifies the river into three major units.
The Geomorphic Reach level further divides each River Segment into reaches based on unique
geomorphic and hydrologic factors. This geomorphic reach level addresses the longitudinal
differentiation of habitat as influenced by physical processes.
The Mainstem Habitat Level categorizes types of main channel, off-channel, and tributary
habitat at the “macro level” that addresses the longitudinal and lateral distribution and frequency
of channel types selected by different species and lifestages. These channel types are further
differentiated into sub-types of split, side channel, slough, etc. The physical processes of the
Susitna River are manifested differentially in these mainstem classifications largely related to the
variable morphology of the habitat types, different hydrologic influences such as surface versus
groundwater flow based and subsequently the flow velocities they experience that influence the
characteristics of these habitats such as depth, temperature, substrate. The historic data from the
1980s suggests that the variable characteristics of these mainstem habitats support different
species and life stages of fishes throughout the year.
The Main Channel and Tributary Level differentiates habitat to mesohabitat scale. This level
narrows and refines the habitat stratification to mesohabitats preferred or not preferred by
different species and lifestages. Again mesohabitats are in part defined by the channel
morphology of the geomorphic reach; gradient, flow, and channel shape all are defining
parameters for mesohabitats. It is the variation in these parameters that affect the utility of
mesohabitat for various species and life stages of fish.
With mainstem and mesohabitats, the Edge Habitat Level is proposed in order to better
understand the longitudinal variation in channel complexity. A high channel complexity index
indicates more edge habitat and greater channel and habitat diversity; important factors in
instream flow and fisheries studies.
4. Services’ Comment: AEA has proposed new habitat classes that do not appear to be
revisions based on the Services’ (or other stakeholders) comments.
RESPONSE ON COMMENTS TO HABITAT MAPPING
Susitna-Watana Hydroelectric Project Alaska Energy Authority
FERC Project No. 14241 Page 3 March 2013
AEA disagrees with this statement. At the October 25, 2012 Fish and Aquatic Resources TWG,
AEA presented preliminary results of the aerial videography flown in September 2012. At that
time, AEA proposed refinements to the classifications based on the habitats that were observed
during video collection and from the video imagery. These refinements were presented to the
TWG, discussion was had and no adverse comments were received. A few further refinements
were made to the RSP classifications based on post-processing of the video, when it was made
clear that specific habitat types, such as the tributary plume classification used in the 1980s, were
more appropriately designated as a unique classification rather than being lumped with tributary
mouths as have previously been proposed.
5. Services’ Comment: AEA’s proposed habitat classification is not consistent among
study plan sections.
The RSP proposes one classification system that will be used by all of the Fish and Aquatic and
Instream Flow studies for site selection, transect placement, as well as defining fish-habitat
associations. Additional on the ground habitat data will be collected during fish distribution and
abundance sampling that will be consistent with the classification system described in RSP
Section 9.9. As a component of the instream flow modeling, AEA will also collect microhabitat
data to develop species and life stage specific habitat suitability criteria (HSC) for use in
instream flow modeling. As described in RSP Section 8.5.4.5.1.1, the data collected for HSC
development will be at sites nested within the habitat classification system and will include
microhabitat variables associated with individual fish and/or redds.
6. Services’ Comment: The additional mainstem macrohabitats result in too many
habitat classes limiting adequate replication.
AEA’s proposed method maps the mainstem and, where feasible, mesohabitats that occur
within the river. The number of replicates for sampling within the habitats as classified is a
function of the site selection methodology. In selecting sites for fish and instream flow
studies, AEA has used statistical tools to ensure that sample site selection will be spatially
balanced, random, and representative of habitats that exist within each of the geomorphic
reaches. Where possible we will sample multiple units of the same habitat type to evaluate
variation in that habitat type within the geomorphic reach. However, the nature of the river is
that some habitats are uncommon in some geomorphic reaches.. AEA’s proposed site
selection methods ensure that these less common habitats will be sampled where they occur.
7. Services’ Comment: Current survey methods bias toward mainstem and larger
order tributaries due to the lack of visibility through riparian vegetation.
The remote imagery is limited in its utility for characterizing channel with heavy riparian
vegetation that obscures the stream channel. As described in the RSP Sections 9.9.5.3.2,
9.9.5.4.1, and 9.9.5.4.2, AEA has proposed ground-based habitat surveys to characterize
RESPONSE ON COMMENTS TO HABITAT MAPPING
Susitna-Watana Hydroelectric Project Alaska Energy Authority
FERC Project No. 14241 Page 4 March 2013
tributary habitats not visible to the camera and to delineate all mesohabitats within Focus
Areas.
8. Services’ Comment: Initial classification is clearly based on water surface
characteristics; therefore, classification is flow dependent and surveys or field
measures need to be conducted under multiple flow conditions.
AEA’s proposed classification is not based on water surface characteristics. The purpose of
habitat mapping is to map the diversity of channel types and underlying channel structure.
Habitat mapping only uses the mesohabitat terms pool, riffle, glide, etc. to describe the
associated underlying structure of the stream, which does not change with flow. Surface water
characteristics are useful to help differentiate between fast water habitats such as glide versus
riffle but they are not the only characteristic used.
Habitat mapping at low flow is the generally accepted scientific approach. First, these are the
conditions when the underlying channel controls that define mesohabitat types are most evident
and can be measured, e.g., the pool tail crest. Second, the low flow condition aquatic habitat is at
its most limited condition for fish populations.
AEA does not agree that habitat mapping needs to be conducted at multiple flows. The Services’
suggestion that habitat mapping should be repeated at multiple flows is inconsistent with
standard scientifically accepted practices and procedures. The purpose of habitat mapping is not
to determine the relationship between flow and habitat. Flow versus habitat relationships will be
studied using instream flow methods, such as the 1-D or 2-D Physical Habitat Simulation Model
(PABSIM), as is proposed in RSP Section 8.5. The Services suggest that many off-channel
habitat types will be eliminated at low flows and therefore should be mapped at multiple flows.
AEA does not agree. The presence and structure of off-channel habitat will be mapped and the
response of off-channel habitat types to changes in flow will be studied using instream flow
modeling methods, as described in RSP Section 8.5.
9. Services’ Comment: Middle and Lower River tributaries should be classified
geomorphically because this level of classification distinguishes areas of salmon
spawning and rearing distribution.
Tributary mouth and habitat lying within the zone of hydrologic influence will be mapped (RSP
Section 9.9) and evaluated, as described in RSP Section 9.12. AEA does not agree that there is a
logical nexus between Project operations and tributary habitat above the Project’s zone of
hydrologic influence.
10. Services’ Comment: The Services request that AEA use their habitat classification
scheme [Table 1 of Interim Comments] for project planning and assessment.
RESPONSE ON COMMENTS TO HABITAT MAPPING
Susitna-Watana Hydroelectric Project Alaska Energy Authority
FERC Project No. 14241 Page 5 March 2013
To better understand and clarify differences between AEA’s and the Services’ habitat
classification approaches, AEA compared, line-by-line, RSP Section 9.9 (Table 9.9-3 and 9.9-4)
with the Services’ Alternative Classification presented in Table 1 of the Interim Comments. The
comparative analysis supports the Services’ statement (Interim Comments, page 4) that “…there
are minor differences between AEA’s and our [Services] proposed approach to habitat
classification…”.
AEA agrees there are only minor differences between the two approaches. Further, AEA
suggests that differences are not sufficient to justify adoption of the Services’ Table 1 over the
classification system described in RSP Section 9.9. Further, considerable habitat mapping
analyses have already been undertaken by AEA using the RSP Section 9.9 classification system
in response to FERC’s January 17, 2013 letter to AEA. Further these habitat mapping results
have been used for development of RSP Section 8.5 and RSP Section 9.5 implementation plans.
Redoing these analyses is not warranted.
The primary differences between the approaches are listed below.
1) The Services’ approach measures microhabitat parameters not included in standard
habitat mapping methods, e.g. vertical hydraulic gradient, nutrients, invertebrate drift,
and water chemistry. AEA will measure these parameters as part of the other aquatic
studies described in the RSP.
2) The Services’ approach proposes some parameters be classified at Level II whereas RSP
Section 9.9 will classify at Level III.
3) The Services’ approach suggests a separate category for backwaters and mouths of
sloughs. AEA will identify mouths and backwaters when mesohabitat mapping sloughs.
RSP Section 9.9 specifically classifies tributary mouths.
4) The Services suggest specifically classifying meander margins, eddies, and side scour
alcoves. AEA suggests that these features are extremely amorphous, ubiquitous, and
non-dimensional, and are therefore not appropriate for specific mapping. Their function
as habitat will be captured in 2-D modeling of Focus Areas.
A detailed comparison of the two classification systems is presented in Attachment 1.
Susitna-Watana Hydroelectric Project Alaska Energy Authority
FERC Project No. 14241 Page 1 March 2013
Attachment 1
A Comparison of Habitat Mapping Classifications and Measured Parameters between NMFS and USFWS
(Services) 02/03/2013 Interim Comments and AEA RSP Section 9.9 Characterization and Mapping of Aquatic
Habitats
Habitat Level Definitions (Annear, T., I. Chisholm, H. Beecher, A. Locke, and 12 other authors, 2004. Instream flows
for riverine resource stewardship, revised edition, Instream Flow Council, Cheyenne, WY.)
Macrohabitat – Abiotic habitat conditions in a segment of river controlling longitudinal distribution of aquatic
organisms, usually describing channel morphology, flow, temperature, or chemical properties or characteristics
with respect to suitability for use by organisms.
Mesohabitat - A discrete area of stream exhibiting relatively similar characteristics of depth, velocity, slope,
substrate, and cover, and variances thereof (e.g., pools with maximum depth <5 ft, high gradient rimes, side
channel backwaters).
Microhabitat – Small localized areas within a broader habitat type used by organisms for specific purposes or
events typically described by a combination of depth, velocity, substrate, cover.
Color Key – The Services’ 02/03/2013 suggested classification or measurement parameters and AEA’s RSP Section 9.9
proposed parameters are:
the same similar different
not suggested by Services but proposed in RSP Section 9.9.
Geomorphic Reach Classification (Level I)
Services – Mainstem and Tributaries AEA RSP Section 9.9 - Mainstem
Channel Width Same
Channel Depth Available when flow routing x-sec are analyzed
Channel Slope Same
Sinuosity Same
Substrate Size Same (from 1980’s data)
Channel Confinement Same (entrenchment ratio)
Average Number of Channels
AEA RSP Section 9.9 - Tributaries
Channel Slope
Confinement
Significant Point of Accretion
Sediment Supply
Macrohabitat Type Classification (Level II)
Services - Mainstem AEA RSP Section 9.9 - Mainstem
Tributary Mouths Similar ( same but classified at Level III)
Main channel Similar (same but classified at Level III)
Side Channel Similar (same but classified at Level III)
Side Slough Similar (same but classified at Level III)
Upland Slough Similar (same but classified at Level III)
Services - Tributaries AEA RSP Section 9.9 - Tributaries
Fast Same
Slow Same
Susitna-Watana Hydroelectric Project Alaska Energy Authority
FERC Project No. 14241 Page 2 March 2013
Mesohabitat Type Classification (Level III)
NMFS - Mainstem AEA RSP Section 9.9 - Mainstem
Mainstem and Side Channel meander margins (eddies (side
scour and alcoves))
Not specifically classified
Mainstem and Side Channel Backwater Pools Similar1
Mainstem and Side Channel Point Bars Not specifically classified
Mainstem and Side Channel Riffles Similar1
Mainstem and Side Channel Runs/Glides Similar1
Beaver Ponds Similar1
Tributary Mouth Backwater Similar1
Tributary Influenced Mainstem Similar1
Side Sloughs Mouths Similar1
Side Slough Scour Pools Similar1
Side Slough Riffles Similar1
Upland Sloughs Mouths Similar1
Upland Slough Scour Pools2 Similar1
Upland Slough Riffles2 Similar1
Split Main Channel
Multiple Main Channel
Split Main Channel
Edge or Channel Complexity Index
Services - Tributaries AEA RSP Section 9.9 - Tributaries
Falls Same
Cascade Same
Chute Same
Rapid Same
Boulder Riffle Same
Riffle Same
Run/Glide Same
Straight Scour Pool Same
Plunge Pool Same
Lateral Scour Pool Same
Backwater Pool Same
Beaver Pond Same
Alcove Same
1/ Off-channel habitats, including tributary mouths, and tributaries within the zone of hydrologic influence will be 100% ground mapped and typed to mesohabitat within Focus Areas.
Outside of Focus Areas, five to ten main channel mesohabitat units and five to ten off-channel habitat units of each type will be randomly selected for sub-sampling. If there are fewer
than the selected number, all units of that habitat type will be sampled.
2/ Services state these habitat types may not exist due to the lack of channel forming flows.
Susitna-Watana Hydroelectric Project Alaska Energy Authority
FERC Project No. 14241 Page 3 March 2013
Habitat Characteristics Microhabitat Types (Level IV)
Services – Mainstem “Microhabitat” AEA RSP Section 9.9 – Mainstem “Microhabitat“
Depth Same3
Velocity Measured as part of RSP Section 8.5
Surface Flow and Groundwater Discharge Measured as part of RSP Section 7.5
Vertical Hydraulic Gradient Measured as part of RSP Section 7.5
Substrate Type Same3
Bank undercut/Riparian cover Same3
Woody debris Same3
Turbidity or Suspended Sediment Measured as part of RSP Section 5.0 –5.5
Dissolved oxygen (intragravel and surface water) Measured as part of RSP Section 5.0 –5.5.4.14
Macronutrients (N, P) Measured as part of RSP Section 5.0 –5.6.4.6
Temperature (intragravel and surface water) Measured as part of RSP Section 5.0 –5.5.4.14
pH, DOC, alkalinity Measured as part of RSP Section 5.0 –5.5.4.1
Invertebrate drift density Measured as part of RSP Section 9.8 – 9.8.4.5
Benthic Organic Matter Measured as part of RSP Section 9.8 – 9.8.4.12
Algal Biomass and Chl-a Measured as part of RSP Section 5.6.4.6 and Section 9.8.4.4
Unit length
Average wetted width
Pool maximum depth
Pool crest depth
Average maximum depth
Width of unit
Percent erosion,
Percent instream cover in unit
Dominant riparian vegetation type
Services – Tributary “Microhabitat” AEA RSP Section 9.9 – Tributary “Microhabitat“
Depth Same. Also collected for HSC, RSP Section 8.5.4.5.1.1.4
Velocity Collected for HSC, RSP Section 8.5.4.5.1.1.4
Surface Flow and Groundwater Discharge Presence of upwelling collected for HSC, RSP Section
8.5.4.5.1.1.4
Vertical Hydraulic Gradient Not measured
Substrate Type Same. Also collected for HSC, RSP Section 8.5.4.5.1.1.4
Bank undercut/Riparian cover Same. Distance to cover also collected for HSC, RSP Section
8.5.4.5.1.1.4
Woody debris Same
Turbidity or Suspended Sediment Collected for HSC, RSP Section 8.5.4.5.1.1.4
Dissolved oxygen (intragravel and surface water) Not measured
Macronutrients (N, P) Not measured. Addressed in Water Quality RSP Section
5.6.4.6
Temperature (intragravel and surface water) Not measured
pH, DOC, alkalinity Not measured
Invertebrate drift density Not measured
Benthic Organic Matter Not measured
Algal Biomass and Chl-a Not measured
Unit length
Average wetted width
Pool maximum depth
Pool crest depth
Average maximum depth
Width of unit
Percent erosion,
Percent instream cover in unit
Dominant riparian vegetation type
3/Parameter will be 100% mapped within Focus Areas. Outside of Focus Areas, parameter mapped in five to ten main channel mesohabitat units and five to ten off-
channel habitat units of each type randomly selected for sub-sampling. If there is fewer than the selected number, all units of that habitat type all will be sub-sampled.
4/ AEA will monitor temperature at the bottom of the water column at each of the proposed transects. AEA also proposes piezometers at the end of each transect in
Focus Areas. Parameter measurements here (including DO and temperature) are intended to indicate potential for detecting groundwater influence on surface water
conditions.