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Susitna-Watana Hydroelectric Project Document
ARLIS Uniform Cover Page
Title:
Synthesis of existing fish population data : final
SuWa 93
Author(s) – Personal:
Author(s) – Corporate:
[Alaska Energy Authority]
AEA-identified category, if specified:
2012 Environmental Study Plans
AEA-identified series, if specified:
Series (ARLIS-assigned report number):
Susitna-Watana Hydroelectric Project document number 93
Existing numbers on document:
Published by:
[Anchorage, Alaska : Alaska Energy Authority, 2012]
Date published:
April 30, 2012
Published for: Date or date range of report:
Volume and/or Part numbers:
Final or Draft status, as indicated:
Final
Document type:
Pagination:
6 p.
Related work(s):
Pages added/changed by ARLIS:
Notes:
All reports in the Susitna-Watana Hydroelectric Project Document series include an ARLIS-
produced cover page and an ARLIS-assigned number for uniformity and citability. All reports
are posted online at http://www.arlis.org/resources/susitna-watana/
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SYNTHESIS OF EXISTING FISH POPULATION DATA –FINAL
INTRODUCTION
The Alaska Energy Authority (AEA) is preparing a License Application that will be submitted to
the Federal Energy Regulatory Commission (FERC) for the Susitna-Watana Hydroelectric
Project (Project) using the Integrated Licensing Process (ILP). The Project is located on the
Susitna River, an approximately 300 mile long river in the Southcentral region of Alaska. The
Project’s dam site will be located at River Mile (RM) 184. The results of this study and of other
proposed studies will provide information needed to support the FERC’s National Environmental
Policy Act (NEPA) analysis for the Project license.
Construction and operation of the Project as described in the Pre-application Document (PAD,
AEA 2011) will affect the flow, thermal, and sediment regimes of the Susitna River, and thus
alter the relative distribution and suitability of aquatic habitats to support native fish
communities. Understanding the ecology of fish, especially the seasonal and spatial distribution
of different fish species and their life stages, will contribute relevant information to assess
potential Project effects. Extensive fisheries data was collected in the 1980s (Harza-Ebasco
1985) and ADF&G has conducted several studies in recent years. The data is summarized in
various reports and data tables and much of the data is unavailable in digital format and has not
been spatially referenced. This study plan outlines the objectives and methods for
characterizing the existing information that will provide a foundation for future licensing studies.
STUDY OBJECTIVE
This study has two objectives. The first objective is to consolidate and synthesize contemporary
and historical fish resource data within the study area into a concise comprehensive reference
document. The second objective is to develop a geospatially-referenced relational database of
fisheries resources from which information can be obtained for use in future analyses, studies
and reports.
The synthesis of existing fish population data will expedite understanding of baseline conditions
by project personnel, agency staff and licensing participants. It will also refine the
understanding of existing information and data gaps presented in the Aquatic Resources Data
Gap Analysis (HDR 2011) and Pre-Application Document (AEA 2011). This improved
understanding will contribute to well-focused aquatic resource study planning and
implementation for 2013-2014.
After reviewing prior studies, the gap analysis, and other available and relevant information, the
available pertinent data will be compiled into a comprehensive database. This will include
geospatial reference wherever possible, and other usable formats. The following is a list of the
types of information likely to be compiled.
The river mile locations for geographic landmarks used in historical studies.
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Resident and anadromous fish species composition within the Upper Susitna River
(upstream of RM 184), the Middle Reach of the Susitna River (RM 184 to RM 99) and the
lower Susitna River (RM 99 to RM 0).
Distribution of resident and anadromous fish species among riverine habitat types
(mainstem, side channel, side slough, upland slough, tributary mouth, and tributary) within
the three river segments.
The relative abundance of fish species in river segments and riverine habitat types.
Run timing, spawning and incubation periods for resident and anadromous species within
each river segment.
Representative indicators for fish growth, condition factor, age structure, and genetic
information.
Physical habitat attributes which appear to be highly beneficial or preferred by species life
stage.
Physical habitat attributes which appear to be limiting to baseline populations.
Fish community, benthic macroinvertebrate community, and habitat conditions at stream
crossings along proposed transmission line and access corridors.
EXISTING INFORMATION
Existing information includes extensive data collected in the 1980s as well as recent ADF&G
studies on fish distribution and relative abundance, salmon escapement, salmon spawning
distribution, and run apportionment. Much of the historical ADF&G anadromous and resident
fish data were compiled by Woodward-Clyde and Entrix (1985). The Aquatic Resources Data
Gap Analysis (ARDGA) (HDR 2011) and PAD (AEA 2011) summarizes existing information and
identifies data gaps for adult salmon, and resident and rearing fish. The ARDGA identified nine
data gaps for adult salmon (AS-1 to AS-9) and 12 for resident and rearing fish (RR-1 to RR-12).
STUDY AREA
The study area includes the Susitna River and its tributaries from its headwaters (~ RM 318)
downstream to Cook Inlet.
METHODS
The work will address the issues and information data gaps outlined in HDR (2011) AS-1 to AS-
9 that are related to existing adult salmon, RR-1 to RR-12, resident and rearing fish, and MP 1
and MP 2 macroinvertebrates and periphyton. Completion of this study will be accomplished in
two phases. Phase I includes an inventory of the historic and contemporary study reports and
coordination with AEA and study leaders within the Fish and Aquatic Program, Instream Flow
Program, and the beluga whale prey studies. Phase II includes development of GIS and
relational database structures, compiling the historic information into GIS layers or database
tables, and synthesis of the information into a technical memorandum.
Phase I is important for defining the scope of the data compilation and synthesis effort. Over
3,500 documents were archived from the 1980s Susitna studies implemented by the Alaska
Power Authority (APA) (Harza-Ebasco 1987) and about 481 of these documents were
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associated with water or aquatic resources that might be important for fulfilling the information
identified above. However, not all of the information will be suitable for compiling into GIS or
relational databases or needs to be synthesized. Consequently, Phase I includes a rapid
inventory of the available historic documents to identify portions pertinent and suitable for
compilation and/or synthesis. Coordination with the other fisheries studies and the Instream
Flow Study is needed to identify the necessary elements for the synthesis and ensure no
duplication of efforts.
Phase I also includes development of an initial report outline that is structured in a clear, logical
manner to present a synthesis of the pertinent information. The outline shall include several
example tables, figures, maps, and text summaries. This information will be provided to AEA for
approval of the outline and approach. At the conclusion of Phase I an Interim Report will be
prepared and AEA and the contractor will meet to re-evaluate the level of effort needed to
complete Phase II of the study.
Phase II includes a detailed review of the documents identified in Phase I, development of GIS
layers, population of relational database tables, and summarization of the information into a
concise summary report. The report will synthesize the information identified below, and any
information identified through coordination with other studies.
Synthesize existing information on fish life history, spatial and temporal distribution, and
relative abundance by species and life stage.
Identify known upstream passage barriers into tributaries and/or factors contributing to
passage barriers into sloughs.
Synthesize recent ADF&G run apportionment and timing data for sockeye, coho, and chum
salmon.
Prepare periodicity charts for each species within the study area (timing of adult migration,
holding, and spawning; timing of incubation, rearing, and outmigration).
Summarize mainstem Susitna River habitat utilization for each species, by riverine habitat
type (main channel, side channel, side slough, upland slough, tributary mouth, and
tributary).
Summarize existing age, size, and genetics information.
Summarize distribution of invasive species, such as northern pike.
Summarize seasonal distribution of macroinvertebrates by riverine habitat types.
Summarize periphyton production within each river segment.
For all compiled or synthesized data and sampling locations with an identifiable spatial
component, develop a spatially referenced relational database, ArcGIS products in a
geodatabase, and maps. Coordinate with the Fish and Aquatics Program GIS manager to
obtain spatial data for recent ADF&G fish studies. Coordination will also occur with the Fish and
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Aquatics GIS and Database Managers to ensure that the GIS layers and database tables meet
the program standards. Develop the summary tables, figures, maps, and text summaries in a
manner that they can be edited as necessary and used in future reports (e.g., MS Word
documents, Excel spreadsheets).
NEXUS BETWEEN PROJECT AND RESOURCES TO BE STUDIED AND HOW THE RESULTS WILL BE USED
Project facilities and operations will modify the flow, thermal, and sediment regimes of the
Susitna River, and thus alter the relative distribution and suitability of aquatic habitats to support
native fish communities. Knowing more about the ecology of native fish, especially the
seasonal and spatial distribution of different fish species and their life stages, will contribute
relevant information to determining what additional information is needed to undertake an
assessment of Project effects.
Existing fish and aquatic resource information appears insufficient to address the following
issues that were identified in the PAD (AEA 2011).
Upper River Fish and Aquatic Issues (Upstream of the Watana Dam Site [RM 184])
F1: Effect of change from riverine to reservoir lacustrine habitats resulting from Project
development on aquatic habitats, fish distribution, composition, and abundance, including
primary and secondary productivity.
F2: Potential effect of fluctuating reservoir surface elevations on fish access and movement
between the reservoir and its tributaries and habitats.
F3: Potential effect of Watana Dam on fish movement.
Middle River Fish and Aquatic Issues (Watana Dam Site [RM 184] downstream to Three River
Confluence [RM 98])
F4: Effect of Project operations on flow regimes, sediment transport, temperature, and water
quality that result in changes to seasonal availability and quality of aquatic habitats,
including primary and secondary productivity. The effect of Project-induced changes include
streamflow, stream ice processes, and channel morphology (streambed coarsening) on
anadromous fish spawning and incubation habitat availability and suitability in the mainstem
and side channels and sloughs in the Middle River above and below Devils Canyon.
F5: Potential effect of Project flow regime on anadromous fish migration above Devils Canyon.
Devils Canyon is a velocity barrier to most fish movement and changes in flows can result in
changes in the potential fish movement through this area (approximately RM 150).
F6: Potential influence of the proposed Project flow regime and the associated response of
tributary mouths on fish movement between the mainstem and tributaries within the Middle
River reach.
F7: Influence of Project-induced changes to mainstem water surface elevations July through
September on adult salmon access to upland sloughs, side sloughs, and side channels.
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F8: Potential effect of Project-induced changes to stream temperatures, particularly in winter,
changing the distribution of fish communities, particularly invasive northern pike.
Lower River Fish and Aquatic Issues (Three River Confluence [RM 98] downstream to Cook
Inlet [RM 01])
F9: The degree to which Project operations affect flow regimes, sediment transport,
temperature, water quality that result in changes to seasonal availability and quality of
aquatic habitats, including primary and secondary productivity.
Thus, the information developed from this study will be used to help determine what additional
fisheries information is needed in combination with information from other resource studies
(e.g., water temperature, fish production, fish distribution and relative abundance, fish access to
side sloughs and tributaries, and instream flow), to assess the Project-related effects of fish
resources and provide a basis for streamflow-related resource management decisions.
PRODUCTS
The work products for this report include a relational database, spatial data products, two
interim reports, a draft technical report, and a final technical report.
Interim Reports. Interim Report No. 1 will describe the results of the document inventory,
include a draft outline for the Technical Memo, and a proposed plan for database development
and for capturing the information present in the tables, figures, maps, and text present in the
available literature. It will include a comprehensive list of references to be synthesized for the
Technical Memo, a list of data sources, and describe the format and availability of data and its
applicability to the current Project. The contractor will identify referenced documents that are not
currently available in the Susitna-Watana ARLIS library. All available data will be compiled and
delivered to AEA. Interim Report No. 2 will include a revised outline for the Technical Memo
that addresses comments on the draft outline from Interim Report No. 1. It will also include a
description of the relational database structure and examples of the tables, figures, and maps
that could be generated from the relational database and GIS. It will provide a preliminary
assessment of missing data and data gaps.
Relational database. A relational database of the existing fisheries data will be prepared
including geospatial references, where available. This database will form the basis for
additional data collection in 2013-2014. This effort will be coordinated with data compilation
efforts being conducted as components of other studies (e.g. Upper River fisheries studies,
Instream Flow, Beluga Whale Prey, etc) to ensure no duplication of efforts. All spatial data will
be converted to geographic coordinates (latitude/longitude) and the WGS84 datum. Naming
conventions of files, data fields and metadata descriptions must meet the ADNR standards
established for the Susitna-Watana Hydroelectric Project.
Spatial products in ArcGIS software. Spatial products will be developed from the relational
database. At a minimum, spatial products will include a geodatabase and maps indicating fish
presence by species-life stage and locations of significant features such as barriers and springs.
Naming conventions of files, data fields and metadata descriptions will meet the standards
established for the Susitna-Watana Hydroelectric Project. All map and spatial data products will
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be delivered in the two-dimensional Alaska Albers Conical Equal Area projection, and North
American Datum of 1983 (NAD 83) horizontal datum consistent with ADNR standards.
Technical Memorandum. A draft technical memorandum, in the form of a concise reference
document with tables, figures, and maps, the QC’d database and all spatial products will be
issued to the Fisheries and Aquatic Resources Work Group for review and comment. The
technical memo will then be finalized.
SCHEDULE
The following schedule is tentative and may be modified.
Interim Report No. 1. – May 4, 2012
Interim Report No. 2 – May 21, 2012
Relational Database and ArcGIS spatial products – June 29, 2012.
Draft Technical Memo – June 29, 2012
Final Technical Memo – August 31, 2012
REFERENCES
Alaska Energy Authority (AEA). 2011. Pre-Application Document: Susitna-Watana Hydroelectric
Project, FERC Project No. 14241, December 29, 2011.
Harza-Ebasco (Harza-Ebasco Susitna Joint Venture). 1985. Fish, wildlife, and botanical
resources. Exhibit E, Volume 11 of the Draft Application for License, Susitna
Hydroelectric Project.
Harza-Ebasco (Harza-Ebasco Susitna Joint Venture). 1987. Susitna Hydroelectric Records
Management System File Reference Report. Alaska Power Authority, Anchorage,
Alaska.
HDR. 2011. Aquatic Resources Data Gap Analysis. Draft, Prepared for Alaska Energy Authority.
July 20, 2011.
Woodward-Clyde Consultants, and Entrix, Inc. 1985. Fish Resources and Habitats in the
Middle Susitna River. Technical Report No. 1. Instream Flow Relationships Series.
Alaska Power Authority Susitna Hydroelectric Project. Vol. 1.