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Susitna-Watana Hydroelectric Project Document
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Title:
Water quality modeling study : model selection
SuWa 110
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Briefing and Technical Documents
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Susitna-Watana Hydroelectric Project document number 110
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[Anchorage, Alaska : Alaska Energy Authority, 2012]
Date published:
May 18, 2012
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Draft
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Technical memorandum
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12 p.
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Notes:
WQ-S3 technical memorandum - draft V1.0
All reports in the Susitna-Watana Hydroelectric Project Document series include an ARLIS-
produced cover page and an ARLIS-assigned number for uniformity and citability. All reports
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WQ-S3
Technical Memorandum - DRAFT
V1.0
Water Quality Modeling Study:
Model Selection
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Alaska Energy Authority Tetra Tech – SWG
813 West Northern Lights Blvd. 1420 Fifth Avenue, Suite 550
Anchorage, AK 99503 Seattle, WA 98101
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ALASKA ENERGY AUTHORITY
AEA
Table of Contents
Contents
1.0 BACKGROUND ..................................................................................................................................................... 1
2.0 PREVIOUS MODELING APPROACH ................................................................................................................. 3
2.1 H2OBAL, SNTEMP AND DYRESM MODEL REVIEW ..................................................................................... 3
2.1 H2OBAL ...................................................................................................................................................... 3
2.2 SNTEMP ...................................................................................................................................................... 3
2.3 DYRESM ..................................................................................................................................................... 4
3.0 OTHER MODELING APPROACHES ............................................................................................................ 6
3.1 Two-Dimensional Approach (CE-QUAL-W2) ............................................................................................ 6
3.2 Three-Dimensional Approach (EFDC) ........................................................................................................ 6
3.3 Qualitative Comparison of Models .............................................................................................................. 7
6.0 TECHNICAL CONSIDERATIONS ....................................................................................................................... 9
6.1 Predicting Vertical Stratification .................................................................................................................. 9
6.2 Nutrient and Algae Representation .............................................................................................................. 9
6.3 Sediment Transport ...................................................................................................................................... 9
6.4 Ability to Represent Metals Concentrations ................................................................................................ 9
6.5 Integration between Temperature and Ice Dynamics Models .................................................................... 10
6.6 Capability of Representing Local Effects .................................................................................................. 10
7.0 RECOMMENDATIONS ....................................................................................................................................... 11
8.0 REFERENCES ...................................................................................................................................................... 12
Water Quality Modeling Study: Model Selection
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1.0 BACKGROUND
The Alaska Energy Authority (AEA) is preparing a License Application that will be submitted to the
Federal Energy Regulatory Commission (FERC) for the Susitna-Watana Hydroelectric Project (Project).
The application will use the Integrated Licensing Process (ILP). The Project is located on the Susitna
River, at River Mile (RM) 184. The dam would be located within a steep-sided river valley approximately
15 miles upstream of Devil’s Canyon. Currently the plan is to construct a 700-foot high dam to impound a
39-mile long reservoir with a gross storage capacity of 4,334,000 acre-feet. The installed capacity of the
power plant would be approximately 600 MW.
Construction and operation of the Project as described in the Pre-application Document (PAD, AEA
2011) will affect flow regimes and water temperature and water quality downstream of the proposed dam
site.
Prior to granting a license, the potential impacts of this project on the environment must be evaluated and
presented to FERC. This can be done by collecting information from the area and using modeling to
project the impacts of the Dam on various physical parameters.
There are a large number of different water quality models available for use. Selection of the appropriate
model is based on a variety of factors, including applicability of the model, necessary data inputs, model
availability, time, stakeholder familiarity, cost, level of expertise required, ease of use, and available
documentation.
This memo provides an overview of select non-proprietary hydrodynamic, temperature, and water quality
models that could be used to simulate the effects of a dam and reservoir on the Susitna River. The
applicability of each model will be evaluated and key considerations will be identified. The desired model
will be able to predictively represent vertical mixing in reservoirs and predict future conditions. The
model should internally couple water quality with the hydrodynamic and temperature modeling processes
in both the reservoir and downstream to allow develop a holistic framework to address the major concerns
in the river.
Under the current study, a multi-dimensional model capable of representing reservoir flow circulation,
temperature stratification, and dam operations among other parameters is necessary. The proposed
reservoir model must account for water quality conditions in the proposed Watana Reservoir, including
temperature, dissolved oxygen (DO), suspended sediment and turbidity, chlorophyll a, nutrients, metals,
and potentially ice formation and breakup. The proposed river model must be able to account for water
quality conditions in the Susitna River downstream of the proposed dam. The river model must also
simulate current Susitna River conditions (in the absence of the dam) for comparison to conditions in the
presence of the dam and reservoir.
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A coupled reservoir and downstream river model is required to facilitate data transfer and associated
inconsistency in prototype representations across multiple models and to increase the efficiency of the
model. The models must also be dynamic to account for within and between day changes in the reservoir
or river as a result of Project operations.
The following section discuss the previous modeling done at the site, as well as other models that might
be utilized and better suited to the needs of the project.
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2.0 PREVIOUS MODELING APPROACH
In the 1980s, hydrologic and temperature modeling was conducted in the Susitna Basin to predict the
effects of one or more dams on downstream temperatures and flows. The modeling suite used was called
H2OBAL/SNTEMP/DYRESM. The modeling suite addressed temperature and had some limited
hydrodynamic representation, but it lacked the ability to predict vertical stratification or local effects (e.g.,
local discharge elevation). In addition, the modeling suite lacked a water quality modeling component.
2.1 H2OBAL, SNTEMP AND DYRESM MODEL REVIEW
The existing H2OBAL/SNTEMP/DYRESM model of the Susitna River basin is perhaps the most obvious
candidate model to implement when assessing the effects of the proposed Susitna-Watana Hydroelectric
Project. The existing model was expressly configured to represent the unique conditions in the Susitna
River basin. However, the modeling suite is limited to flow and temperature predictions and is based on
the modeling technology available in the early 1980s. Hydrodynamics are simplified, and water quality is
not addressed.
The Arctic Environmental Information and Data Center (AEIDC) previously completed a study that
examined the temperature and discharge effects if the proposed Susitna Hydroelectric Project was
completed and compared the effects to the natural stream conditions, without a dam and reservoir system
(1983a). The study also assessed the downstream point at which post-project flows would be statistically
the same as natural flows. The functions of the multiple models used in the assessment were: SNTEMP, a
riverine temperature model, H2OBAL, a water balance program and DYRESM, a reservoir
hydrodynamic model.
The simulation period covered the years 1968 through 1982. Only the summer period was simulated.
Historical meteorological and hydrological were data to represent normal, maximum and minimum
stream temperature conditions, represented by the years 1980, 1977, and 1970, respectively (AEIDC
1983a). Post-project conditions were modeled for these summer periods to compare natural conditions to
post-project stream temperatures. Due to a lack of data, a monthly time-step was used in these summer
condition simulations.
2.1 H2OBAL
Mainstem discharges from the Watana dam site were estimated from statistically based streamflow data
and a water balance program – H2OBAL, which computed tributary inflow on a watershed area-weighted
basis. Post-project flows were predicted for both a one-dam scenario and a two dam scenario using
release discharge estimates from a reservoir operation schedule scenario in the FERC licensing
application. Flows derived from H2OBAL were input into SNTEMP.
2.2 SNTEMP
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SNTEMP is a riverine temperature simulation model that can predict temperature on a daily basis but can
also predict for longer periods, allowing analysis of both critical river reaches at a fine scale and the full
river system over a longer averaging period (AEIDC 1983b). SNTEMP was selected because it contained
a regression model that could fill in data gaps in temperature records. This was useful in the Susitna
River because data records were sparse. SNTEMP can also be calibrated to adjust for low-confidence
input parameters. SNTEMP outputs include average daily water temperatures and daily maximum and
minimum temperatures.
SNTEMP contains several sub-models, including a solar radiation model that predicts solar radiation
based on stream latitude, time of year, topography, and meteorological conditions (AEIDC 1983b).
SNTEMP was modified to include the extreme shading conditions that occur by developing a monthly
topographic shading parameter. Modifications were made to represent the winter air temperature
inversions that occur in the basin. Sub-models were also included for heat flux, heat transport, and flow
mixing.
SNTEMP validation indicated that upper tributary temperatures were underpredicted (AEIDC 1983b).
Most of the data for the tributaries was assumed or estimated, leading to uncertainty. Five key poorly
defined variables were identified as possible contributors to the under-prediction of temperatures: stream
flow, initial stream temperature, stream length, stream width and distributed flow temperatures.
Distributed flow temperatures were highlighted as the most important of the five variables. During
calibration, groundwater temperature parameters were adjusted to modify distributed flow and improve
tributary temperature prediction.
Water temperatures were derived from USGS gages, but when data was lacking, SNTEMP computed
equilibrium temperatures and then estimated initial temperatures from a regression model. AEIDC noted
that the reliability of the regression models “restricts the accuracy of the physical process temperature
simulations” (1983a). The level of confidence in the regression model varied by the amount of gage data
available. Continuous data yielded higher confidence, while years with only grab sample data notably
decreased the confidence in the predicted temperatures.
2.3 DYRESM
The DYRESM model is a one-dimensional, hydrodynamic model designed specifically for medium size
reservoirs (Patterson, et al. 1977). The size limitation ensures that the assumptions of the model algorithm
remain valid. DYRESM predicts daily temperature and salinity variations with depth and the temperature
and salinity of off-take supply. The reservoir is modeled as horizontal layers with variable vertical
location, volume, temperature and salinity. Mixing between layers is through amalgamation. Inflow and
withdrawal are modeled by changes in the horizontal layer thickness, and insertion or removal of layers as
appropriate. The model incorporates up to two submerged off-takes and one overflow outlet. Model
output is on a daily time-step.
The DYRESM model was run to simulate the two reservoir scenario for 1981 conditions. Other reservoir
release temperature estimates were not available (AEIDC 1983a). The AEIDC report cautions that the
results from 1981 may not be representative of other years due to annual variations in meteorology,
hydrology, reservoir storage, and power requirements (1983a). The lack of reservoir release temperature
data limited the simulation of downstream temperatures under operational conditions to one year.
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AEIDC noted that the “effort to delineate river reaches where post-project flows differ significantly from
natural flows has been unsuccessful” (1983a). This was attributed in large part to the lack of estimates for
the reservoir release temperatures. Additional data was needed to increase the predictive ability of
SNTEMP.
Perhaps the biggest limitations of the existing H2OBAL/SNTEMP/DYRESM modeling suite as
implemented historically are the lack of suitable data, simplified hydrology and the lack of a water quality
component. Modeling was limited to discharge and temperature. Other issues that limit the suitability of
the modeling suite for the Susitna River basin project were the chronic under-prediction of upper tributary
temperatures, and the inability to predict vertical stratification within the reservoir.
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3.0 OTHER MODELING APPROACHES
Three general approaches have been considered for applicability to the Susitna River basin project. The
first is implementation of the existing H20BAL/SNTEMP/DYRESM modeling suite that was used to
model the Susitna River basin in the early 1980s. The second is implementation of a two-dimensional
hydrodynamic and water quality modeling framework (i.e., CE-QUAL-W2). The third is implementation
of a three-dimensional hydrodynamic and water quality modeling framework (i.e., Environmental Fluid
Dynamics Code [EFDC]). All approaches have their merits and limitations.
3.1 Two-Dimensional Approach (CE-QUAL-W2)
The U.S. Army Corps of Engineers’ CE-QUAL-W2 is a two-dimensional, longitudinal/vertical (laterally
averaged), hydrodynamic and water quality model (Cole et al 2000). The model allows for application to
streams, rivers, lakes, reservoirs, and estuaries with variable grid spacing, time -variable boundary
conditions, and multiple inflows and outflows from point/nonpoint sources and precipitation.
The two major components of the model include hydrodynamics and water quality kinetics.
Both of these components are coupled, i.e. the hydrodynamic output is used to drive the water
quality at every time-step. The hydrodynamic portion of the model predicts water surface
elevations, velocities, and temperature. The water quality portion can simulate 21 constituents
including DO, nutrients, phytoplankton interactions, and pH. A dynamic shading algorithm is
incorporated to represent topographic and vegetative cover effects on solar radiation. This
model has model has been extensively tested, documented, and applied to environmental
studies world-wide by universities, governmental agencies, and environmental consulting
firms.
3.2 Three-Dimensional Approach (EFDC)
The EFDC model was originally developed at the Virginia Institute of Marine Science and is considered
public domain software (Hamrick 1992). This model is now being supported by US Environmental
Protection Agency (EPA). EFDC is a dynamic, three-dimensional, coupled water quality and
hydrodynamic model. In addition to hydrodynamic, salinity, and temperature transport simulation
capabilities, EFDC is capable of simulating cohesive and non-cohesive sediment transport, near field and
far field discharge dilution from multiple sources, eutrophication processes, the transport and fate of toxic
contaminants in the water and sediment phases, and the transport and fate of various life stages of finfish
and shellfish. The EFDC model has been extensively tested, documented, and applied to environmental
studies world-wide by universities, governmental agencies, and environmental consulting firms.
The structure of the EFDC model includes four major modules: (1) a hydrodynamic model, (2) a water
quality model, (3) a sediment transport model, and (4) a toxics model. The water quality portion of the
model simulates the spatial and temporal distributions of 22 water quality parameters including DO,
suspended algae (3 groups), periphyton, various components of carbon, nitrogen, phosphorus and silica
cycles, and fecal coliform bacteria. Salinity, water temperature, and total suspended solids are needed for
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computation of the 22 state variables, and they are provided by the hydrodynamic model. EFDC
incorporates solar radiation using the algorithms from the CE-QUAL-W2 model.
3.3 Qualitative Comparison of Models
Table 1 presents an evaluation of the models applicability to a range of important technical, regulatory,
and management considerations. Technical criteria refer to the ability to simulate the physical system in
question, including physical characteristics/processes and constituents of interest. Regulatory criteria
make up the constraints imposed by regulations, such as water quality standards or procedural protocol.
Management criteria comprise the operational or economic constraints imposed by the end-user and
include factors such as financial and technical resources. Although the evaluation is qualitative, it is
useful in supporting a model determination based on the factors that are most critical to this project, in
particular. The relative importance of each consideration, as it pertains to the project, are presented
alongside the models’ applicability ratings.
Table 1: Evaluation of Models Based on Technical, Regulatory, and Management Criteria
High Suitability Medium Suitability Low Suitability
Considerations Relative
Importance
H2OBAL/SNTEMP/
DYRESM CE QUAL W2 EFDC
Technical Criteria
Physical Processes:
advection, dispersion High
momentum High
compatible with external ice
simulation models High
reservoir operations High
predictive temperature
simulation (high latitude
shading)
High
Water Quality:
total nutrient concentrations High
dissolved/particulate
partitioning Medium
predictive sediment
diagenesis Medium
sediment transport High
algae High
dissolved oxygen High
Temporal Scale and Representation:
long term trends and
averages Medium
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High Suitability Medium Suitability Low Suitability
Considerations Relative
Importance
H2OBAL/SNTEMP/
DYRESM CE QUAL W2 EFDC
continuous – ability to
predict small time-step
variability
High
Spatial Scale and Representation:
multi-dimensional
representation High
grid complexity - allows
predictions at numerous
locations throughout model
domain
High
suitability for local scale
analyses, including local
discharge evaluation
Medium
Regulatory Criteria
Enables comparison to AK criteria High
Flexibility for analysis of scenarios,
including climate change High
Technically defensible (previous
use/validation, thoroughly tested,
results in peer-reviewed literature,
TMDL studies)
High
Management Criteria
Existing model availability High
Data needs High
Public domain (non-proprietary) High
Cost Medium
Time needed for application Medium N/A
Stakeholder community familiarity Low
Level of expertise required Low
User interface Low
Model documentation Medium
Based on the evaluation summarized in the table above, the existing H2OBAL/SNTEMP/DYRESM suite of
models is not suitable for conducting the current analysis because it lacks the capability to address the
major water quality concerns, and lacks the predictive capability needed to address the response of the
reservoir to future conditions. Therefore, the modeling approach should be selected from the two multi-
dimensional models and based on key technical considerations.
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6.0 TECHNICAL CONSIDERATIONS
The following discussion highlights some of the key technical considerations for modeling associated
with the Susitna River basin project and compares the ability of CE-QUAL- W2 and EFDC to address
these considerations. For informational purposes, the SYNTEMP/DYRESM modeling suite is also
discussed in the technical considerations. Based on a review of the literature, some key factors that will
likely be important in the modeling effort include:
1. Predicting vertical stratification in the reservoir when the dam is present;
2. Nutrient and algae representation;
3. Sediment transport;
4. Ability to represent metals concentrations;
5. Integration between temperature and ice dynamics models; and
6. Caability ofrepresent local effects.
6.1 Predicting Vertical Stratification
Both EFDC and CE-QUAL-W2 are equipped with turbulence closure schemes which allow prediction of
temporally/spatially-variable vertical mixing strength based on time, weather condition, and reservoir
operations. Therefore, both are capable of evaluating the impact of dam/reservoir operations/climate
change on reservoir stratification. In contrast, the existing SYNTEMP/DYRESM model does not have the
necessary predictive capability because vertical stratification is represented based on parameterization
through calibration. Therefore, it cannot represent the response of vertical mixing features to the changes
in external forces.
6.2 Nutrient and Algae Representation
Both EFDC and CE-QUAL-W2 are capable of simulating dynamic interactions between nutrients and
algae in reservoirs and interactions between nutrients and periphyton in riverine sections. This is very
important for addressing the potential impact of the proposed project on water quality and ecology in the
river. EFDC has additional nutrient predictive capabilities due to its sediment diagenesis (sediment
change) module, which simulates interactions between external nutrient loading and bed-water fluxes.
EFDC is thus capable of predicting long-term effects of the proposed project. CE-QUAL-W2 does not
have the sediment diagenesis predictive capability. The existing SNTEMP/DYRESM modeling suite is
not capable of representing nutrient and algae interactions.
6.3 Sediment Transport
EFDC is fully capable of predicting sediment erosion, transport, and settling/deposition processes. CE-
QUAL-W2 has limited sediment transport simulation capabilities. It handles water column transport and
settling; however, it is not capable of fully predicting sediment bed resuspension and deposition
processes. SNTEMP/DYRESM is not capable of simulating sediment transport.
6.4 Ability to Represent Metals Concentrations
EFDC is fully capable of simulating fate and transport of metals in association with sediments in both
rivers and reservoirs. CE-QUAL-W2 does not have a module to simulate metals; however, a simplified
representation can be implemented using the phosphorus slot in the model and simple partitioning (to
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couple with its basic sediment transport representation). The SNTEMP/DYRESM is not capable of
addressing metals issues.
6.5 Integration between Temperature and Ice Dynamics Models
The CE-QUAL-W2 model has a coupled temperature-ice simulation module, which is of moderate
complexity and predictive capability. EFDC has a slightly simpler ice representation which was
previously applied to a number of Canadian rivers. Both models, however, can be coupled to external ice
models with a properly designed interface to communicate temperature results. Fully predictive
simulation within either model would require code modification to handle the interaction between
temperature simulation, ice formation and transport, and hydrodynamics simulation, and water quality
simulation.
6.6 Capability of Representing Local Effects
CE-QUAL-W2 is a longitudinal-vertical two-dimensional model; therefore, it is capable of resolving
spatial variability in the longitudinal and vertical directions. It is not capable of representing high
resolution local effects such as lateral discharge, areas impacted by secondary circulation, or certain
habitat characteristic changes. EFDC is a three-dimensional model which can be configured at nearly any
spatial resolution to represent local effects. SNTEMP/DYRESM is a one dimensional modeling suite and
therefore has limited capability representing local effects.
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7.0 RECOMMENDATIONS
Based on the review of select models described above, we recommend using the EFDC model for the
Susitna-Watana Hydroelectric Project.
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8.0 REFERENCES
Arctic Environmental Information and Data Center (AEIDC). 1983a. Examination of Susitna River
Discharge and Temperature Changes Due to the Proposed Susitna Hydroelectric Project – Final Report.
Prepared by Arctic Environmental Information and Data Center Anchorage, AK. Submitted to Harza-
Ebasco Susitna Joint Venture Anchorage, AK. Prepared for the Alaska Power Authority, Anchorage, AK.
AEIDC. 1983b. Stream Flow and Temperature Modeling in the Sustina Basin, Alaska. Prepared by Arctic
Environmental Information and Data Center Anchorage, AK. Submitted to Harza -Ebasco Susitna Joint
Venture Anchorage, AK. Prepared for the Alaska Power Authority, Anchorage, AK.
Cole, T.M. and S. A. Wells. 2000. CE-QUAL-W2: A two-dimensional, laterally averaged, Hydrodynamic
and Water Quality Model, Version 3.0, Instruction Report EL-2000. US Army Engineering and Research
Development Center, Vicksburg, MS.
Hamrick, J.M. 1992. A Three-Dimensional Environmental Fluid Dynamics Computer Code: Theoretical
and Computational Aspects, Special Report 317. The College of William and Mary, Virginia Institute of
Marine Science. 63 pp.
Patterson, John, J. Imberger, B. Hebbert, and I. Loh. 1977. Users Guide to DYRESM – A Simulation
Model for Reservoirs of Medium Size. University of Western Australia, Nedlands, Western Australia.